Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1034 ATGGCACAGAAGAAGCAACAGGTCCATCCCATTGAACCCACTGGTGGGCCAGCCAAAACTGATGTAGAGTCTGAGGAGCTTCGCCGCATGAAATGCACAAGATATATAGCATATCTTTCTGCTTTTGCTTTGTTCGAGACCATTGTTATAATGGTCTGTGTAGTCACCCTGATGCGTATCAGGAGTCCGAAGTTTCGGTTCCGTGCTGTTTCTATTGAGAATCTCAACTATACATCCGACACAACTTCACCCTCATTTAACATTAGATTCAATGCCAAAGTCGCTGTCAAGAACACCAATTTTGGACACTTCAAATTCAAGAACAGCACCATTACTCTAGCTTACAGAGGTGATCATGTTGGGGATGCCAAGATTTCCAAGGCTCGAGCTCGGGCTAGATCCACCAAAAAGATGAATGAACTCGTCAAATATGACCTTGATATAGACATTTTCACTAAGAAGAAAAAGAAGCAGCAAGCAGCCCAAGAAGAAGCAGCAAGCAGCCATGCATTGGGATTTAAGCAACTTGTGAAATGTGGCCTTGATATAGACATTTTCACTAAGAAGAAGAAGAAGAAATGA 582 0.4261 MAQKKQQVHPIEPTGGPAKTDVESEELRRMKCTRYIAYLSAFALFETIVIMVCVVTLMRIRSPKFRFRAVSIENLNYTSDTTSPSFNIRFNAKVAVKNTNFGHFKFKNSTITLAYRGDHVGDAKISKARARARSTKKMNELVKYDLDIDIFTKKKKKQQAAQEEAASSHALGFKQLVKCGLDIDIFTKKKKKK* 194
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1034 193 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 37 139 - -
Vvi16g1034 193 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi16g1034 Vvi-Chr16 18692112 18696266 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1034 - - vvi:104882183 325.865