Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1028 ATGGAGTCAGTACTGGTACTGTATCCTTCACCAGCCATGGGTCATCTTATCTCCATGGTGGAGCTTGGGAAGCTCATTCTTAAATACTATCCTTCAATTTCCATCACCATCCTCACCATCACCCCACCTTTCGACACCGGCGCTACCGCCTCTTATATCGCCGGCGTCTCCTCCACTACCCCTTCCATCACCTTCCACCACCTTTCCACCACCCCTCTCCCTCGACCTGTCTCCTCCTACCCCTCCTTTGAAGCTCTAACCTCTGAGCTCTTAACCCTCAACAACCCTAATGTCCACCATGCCCTCCAGTCCATATCTCTCAACTCCACTGTCCTCGCCTTTATCATCGACTTCTTCTGCACCCCAGCTCTCGGCGTCGCCAAAGAACTCAACATTCCGGCCTACTATTTCTTCACCTCCTCCGGCACTGGCCTCGCCTTGTTCCTCTACTTCCCTACTCTTCACCGGAAAAACACTCAGCGTTTCAGAGATACGAATACCATTCATGAAGTTCCGGGGTTGCCGCCGTTACCATCGGCGGATATGCCGGGGCCGCTGCTGGACCGGACCAGCAAAGAGTATGAATCTTTTCTATACTACGCTACCCACATTTCGAAATCAGCTGGAATCATTGTGAACACGTTTGAATCCTTGGAATCGGAAGCTGTGAAAGCGATTTATGATGGGCTCTGTGTGACGGATGGTCCTACACCGCCAGTTTTCTGCATCGGACCGTTGATTGCTACACAGGGCGGACATGGTGGGGGAGGTGAAAAAGAGTACTGTTTAAAGTGGCTGAACTCGCAGCCAAAACGAAGCGTCGTGTTTCTGTGCTTTGGCAGCTTGGGCGTCTTTTCAGAAGCGCAGTTGAAGGAAATTGCAGTTGGGTTAGAGAAGAGCGGGCAGAGGTTCTTGTGGGTGGTCCGCAGCCCACCTTCCAAGGACAAGAGCAGGCGCTTTCTAGCACCATCCGATCCGGATTTGGATTCCTTACTCCCAGATGGATTCTTAGATAGAACCAAGGACAGGGGCCTGGTGGTAAAGTCATGGGCTCCACAGGTGGCAGTGCTGAATCACGGCTCGGTTGGCGGGTTCGTGACTCACTGCGGGTGGAACTCGGTTCTGGAAGCCGTATCCAGCGGCGTGCCGATGGTGGCATGGCCGCTGTACGCGGAGCAGAGGTTTAATAAGGTTATGTTGGTTGAAGAAATGAAGGTAGCATTGCCATTGGAGGAATCAAAATCAGGGCTCGTGACAGCCACTGAGGTTGAGAAGCGGGTTAGAGAGTTGATGGAGACTGAGAAAGGATTCAACATTAGGAACCAGGTTAAGGCCATGAAAGAGGAAGCTAAGGCTGCGATGAACGACGGAGGGTCGTCTCTTGTCGCATTAGACAAGCTACTCAAGTCATGTCGACAGAAACAAATCTGA 1431 0.5206 MESVLVLYPSPAMGHLISMVELGKLILKYYPSISITILTITPPFDTGATASYIAGVSSTTPSITFHHLSTTPLPRPVSSYPSFEALTSELLTLNNPNVHHALQSISLNSTVLAFIIDFFCTPALGVAKELNIPAYYFFTSSGTGLALFLYFPTLHRKNTQRFRDTNTIHEVPGLPPLPSADMPGPLLDRTSKEYESFLYYATHISKSAGIIVNTFESLESEAVKAIYDGLCVTDGPTPPVFCIGPLIATQGGHGGGGEKEYCLKWLNSQPKRSVVFLCFGSLGVFSEAQLKEIAVGLEKSGQRFLWVVRSPPSKDKSRRFLAPSDPDLDSLLPDGFLDRTKDRGLVVKSWAPQVAVLNHGSVGGFVTHCGWNSVLEAVSSGVPMVAWPLYAEQRFNKVMLVEEMKVALPLEESKSGLVTATEVEKRVRELMETEKGFNIRNQVKAMKEEAKAAMNDGGSSLVALDKLLKSCRQKQI* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1028 476 FunFam Glycosyltransferase 5 253 - -
Vvi16g1028 476 Gene3D Glycogen Phosphorylase B; 259 455 - -
Vvi16g1028 476 Gene3D Glycogen Phosphorylase B; 6 460 - -
Vvi16g1028 476 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 469 - -
Vvi16g1028 476 CDD GT1_Gtf-like 6 464 IPR002213 GO:0008194
Vvi16g1028 476 ProSitePatterns UDP-glycosyltransferases signature. 350 393 IPR035595 -
Vvi16g1028 476 PANTHER GLYCOSYLTRANSFERASE 5 472 - -
Vvi16g1028 476 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 265 430 IPR002213 GO:0008194
Vvi16g1028 476 FunFam Glycosyltransferase 260 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1028 Vvi-Chr16 18585339 18586769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1028 2 474 Glycosyltransferase AT3G16520 51.471 1.09e-162 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1028 - - vvi:100268157 912.909