Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1027 ATGCCGGCGCCGCTGATGGACCGGACCAGTAAAGAATATGAATCTTTTCTGTATTACACCACCCACGCGCCGAAATCAGCTGGAATCATTGTGAAGACGTTCGAATCCTTGGAACCAATGGCTCTTAAGGCGGTGAGAGATGGGCTGTGTGTAACGGATGGTCCTACACCGCCCGTGTTCTCTATCGGGCCGTTGATTGCCACACAAGGCGGAGATGGTGGAGAACATGGGAAGAAGTGTTTAAAGTGGCTGGACTCGCAGCCAAAACGCAGCGTAGTGTTTCTGTGTTTTGGCAGCATGGGTTTATTTTCGGAAGAGCAGTTGAAGGAAATAGCAGTTGGGCTAGAGAGGAGTGGACAGAGGTTCTTGTGGGTGGTGCGCAGTCCATCCTCCAAGGACCAGAGCCGGCGCTTTTTAGCGCCACCCGATCCGGATTTGGGTTCGTTACTACCAGACGGATTCCTAGAAAGAACCCAGGAGAGGGGACTGGTGGTGAAGTCATGGGCTCCACAGGTGGCAGTACTGAGTCATATCTCGGTTGGTAGGTTCGTCACTCACTGCGGGTGGAACTCGGTGCTTGAGGCGGTATCCTCGGGCGTGCCGATGGTGGGTTGGCCGCTATACGCGGAGCAGAGGTTCAATAAAGTCGTGTTGGTTGAAGAACTGAAGATAGCATTAGCAATGGAGGAGTCAGAAGGGGGACTGGTGACAGCAATTGAGGTTGAGAAGCAAGTTAAAGAGCTGATGGAGACTGAGAAAGGATTTTCAATCAGGAGTCGGATCACTGACTTGAAGGAGGAAGCTAGGGCTGCAATAAGCGATGGAGGGTATGTAAGATTCCATATTCTGAATAATGATCATACAGGATCATAA 873 0.512 MPAPLMDRTSKEYESFLYYTTHAPKSAGIIVKTFESLEPMALKAVRDGLCVTDGPTPPVFSIGPLIATQGGDGGEHGKKCLKWLDSQPKRSVVFLCFGSMGLFSEEQLKEIAVGLERSGQRFLWVVRSPSSKDQSRRFLAPPDPDLGSLLPDGFLERTQERGLVVKSWAPQVAVLSHISVGRFVTHCGWNSVLEAVSSGVPMVGWPLYAEQRFNKVVLVEELKIALAMEESEGGLVTAIEVEKQVKELMETEKGFSIRSRITDLKEEARAAISDGGYVRFHILNNDHTGS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1027 290 FunFam Glycosyltransferase 78 273 - -
Vvi16g1027 290 Gene3D Glycogen Phosphorylase B; 78 273 - -
Vvi16g1027 290 PANTHER GLYCOSYLTRANSFERASE 1 276 - -
Vvi16g1027 290 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 75 250 IPR002213 GO:0008194
Vvi16g1027 290 CDD GT1_Gtf-like 1 273 IPR002213 GO:0008194
Vvi16g1027 290 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 277 - -
Vvi16g1027 290 Gene3D Glycogen Phosphorylase B; 1 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1027 Vvi-Chr16 18582713 18583585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1027 1 276 Glycosyltransferase AT3G16520 51.799 2.20e-97 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1027 - - vvi:100268157 443.736