Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1021 ATGGAGAGTGTTGTCTTGTATCCATCACCAGGGATGGGTCACCTCATCTCAATGGTGGAGCTTGGAAAGCTTATACTGAAACACCATCCTTCATTCTCCATCACCATATTCATTGTCACTCCACCTTACAACACTGGCTCTACTGCTCCTTATCTCGCCCGCGTCTCCTCCACCATTCCTTCCATCACTTTCCACCACCTCCCCACCATTTCTCTCCCTCTCGATTCTTTCTCCTCTCCCAACCATGAAACCCTTGCTTTCGAGCTCCTCCGCCTCAACAACCCTAACATCCACCAGGCCCTTGTGTCCATCTCCAACAATTCCTCCGTCCGTGCCCTTATCGTTGATTGCTTCTGTACAGCGGCGCTTTCTGTGGCTGCTCAACTCAACATTCCATTCTACTATTTCTTCACTTCTGGCGCCTGCTGCCTCGCTTCCTTCCTTTACCTCCCTTTCATTCACCAGCAGACTACCAAAAGCTTTAAAGACCTCAACACCCATCTCCATATTCCGGGTTTACCGCCGGTACCGGCCTCTGACATGGCGAAGCCGATACTTGACAGGGAGGATAAGGCTTATGAGTTATTCGTAAACATGTCCATACACTTGCCAAGATCAGCTGGAATCATTGTGAACACCTTTGAAGCGCTGGAACCAAGAGCTGTCAAAACGATTTTGGATGGGCTCTGCGTCCTTGACGGTCCAACCTCACCAATATTCTGCATAGGACCATTAATTGCAGCTGATGATCGATCCGGTGGCGGCATTCCCGAGTGTTTGACATGGCTCGAATCTCAACCAAAACGCAGCGTTTTGTTTTTGTGTTTTGGGAGCTTGGGTTTGTTCTCAGAAGAACAGTTGAAGGAGATAGCGGTTGGGTTAGAGAGGAGTGGGCAGAGGTTCTTGTGGGTAGTGCGGAGCCCACCCTCCAAGGACCCGAGCAGGCGTTTTTTAGCACCACCGGACCCAGATTTGAATTCCCTTCTCCCAGATGGGTTTTTGGATCGAACCAAGGAGAGGGGCCTAGTGGTGAAGTCGTGGGCGCCTCAGGTGGCCGTCTTGAATCACGCCTCTGTTGGAGGGTTTGTGACTCACTGCGGGTGGAACTCAGTGCTTGAAGCTGTGTGCGCCGGCGTGCCAATGGTGGCGTGGCCACTATATGCCGAGCAAAGGTTTAACAGGGTGGTGATGGTGGAGGAACTGAAGCTAGCCTTGCCAATGGAAGAGTCGGAAGAAGGTTTTATTACTGCAACTGAGGTTGAGAAGCGAGGTAGAGAGTTGATGGAGTCGGAGGAAGGGAACACCCTTCGTCTCCGGATCATGGCCATGAAAAAAGCTGCTGAGACTGCAATGAGCGACGGTGGATCATCCCGCAACGCATTAACAAAACTGGTCGAGTCATGGAGGCTAGGATAG 1416 0.5134 MESVVLYPSPGMGHLISMVELGKLILKHHPSFSITIFIVTPPYNTGSTAPYLARVSSTIPSITFHHLPTISLPLDSFSSPNHETLAFELLRLNNPNIHQALVSISNNSSVRALIVDCFCTAALSVAAQLNIPFYYFFTSGACCLASFLYLPFIHQQTTKSFKDLNTHLHIPGLPPVPASDMAKPILDREDKAYELFVNMSIHLPRSAGIIVNTFEALEPRAVKTILDGLCVLDGPTSPIFCIGPLIAADDRSGGGIPECLTWLESQPKRSVLFLCFGSLGLFSEEQLKEIAVGLERSGQRFLWVVRSPPSKDPSRRFLAPPDPDLNSLLPDGFLDRTKERGLVVKSWAPQVAVLNHASVGGFVTHCGWNSVLEAVCAGVPMVAWPLYAEQRFNRVVMVEELKLALPMEESEEGFITATEVEKRGRELMESEEGNTLRLRIMAMKKAAETAMSDGGSSRNALTKLVESWRLG* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1021 471 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 468 - -
Vvi16g1021 471 PANTHER GLYCOSYLTRANSFERASE 3 469 - -
Vvi16g1021 471 FunFam Glycosyltransferase 257 452 - -
Vvi16g1021 471 Gene3D Glycogen Phosphorylase B; 4 457 - -
Vvi16g1021 471 CDD GT1_Gtf-like 4 461 IPR002213 GO:0008194
Vvi16g1021 471 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 264 399 IPR002213 GO:0008194
Vvi16g1021 471 Gene3D Glycogen Phosphorylase B; 257 452 - -
Vvi16g1021 471 ProSitePatterns UDP-glycosyltransferases signature. 347 390 IPR035595 -
Vvi16g1021 471 FunFam Glycosyltransferase 4 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1021 Vvi-Chr16 18494181 18503321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g1021 2 468 Glycosyltransferase AT3G16520 56.356 1.18e-179 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1021 - - vvi:100256130 907.901