Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1011 ATGGATTCACCAACTCAACCCCAGAACCCTCCCCACCACCACCCCCTCAAGGCCGCCCACCAATTCTTCTGCTCCACTGCCTCCAATCTCCTCTCCCTCCTCCCCTCCAAAACGACGCCGTTTTCTCCTAAACCAGCTCCGGTGTGCTTCCCAAACCCATCGAAGATCTGCGTCCCCCTCTTTTTTGCTTCCCCTGCCCCTCAACTTCCATCCTCCGAGTCAGCTCAGTCTAACTCGGCGTCCGCGACGAAGGGAGAGTCGCCGGAGTCGGGCTCAGCGTTCCCGAAGGATGTGAGAATCGGCGGCCTGAACACTTCCGCAAAAGGTGGGGGACCAGCGTTTGTGGGGCAGGTTTTCAGTATGTGTGATGTTTCTGGGAATGGTATCATGGCAGTTTCGAATCATTTTGATATACCTTTCATTTCGAAAAGGATGCCTCAGCGGATTAAGAAGATGTTTGCAACAATCACTAAGAGTGATAAGAATGGCCCTGTATTTCGGTTTTTCATGGATCTAGGTGATGCAGTTCGGTATGTTAAAAAGCTGAACATTCCAAGTGGTGGCGTGGGTGCATGTCGTCTTGATTTAGCTTATGGGCATTTCATGGAAAAACCTCACTTATTCCGGTTTGTTCCAAATGAGAAACAGGTCAAGGCAGCCAACAAACTTCTTAAGAAAATCCCACAAAATGGTGGAAGGAAAAGGATAGATGGTGTTCCTGTTTTCACTGCCCAAAACTTAGACATAGCAATAGCAACAACAGATGGGATTAAGTGGTATACTCCATACTTCTTTGATAAACATACGCTGGACAGTATTCTTGAACAGTCCATCGATCATCATTTTCATCATCTAATTCAAAGTCGGCATGTCCAACGCCGGCGGGATGTAATCGATGACAACTTGGCAGCAGAAGTGCTTGAAGACAATGCTGAGAGCCTATGGGAGCCACCAGAGGTTCAAGAAGTGCTTGATGAGGTGGGCCATCCTGGAATACCTTTGAGTGTCATATCAAAGGCTGCTGAAATGCAGCTTCTGTATGCTGTTGACAGAGTGCTGCTGGGGAACCGGTGGTTACGAAAAGCCACTGGCATTCAACCAAAATTTCCTTACATGGTGGATTCGTTTGAGAAAAGGAGTGCAGCTTCCTTTCGTAGAGCATCTCCGTCAAAGAGATTTGTTGCCAGCCCTGAAATGGGAAATGACAATAAAGATACTGAAGAGCTTGGCCCTTCTGACCCCAAATTAGAAGATAACACTCAAAGAGACCAAGGACAAAATTCCGCATCCTGGTTCCCCGTTTGGGATTTGTTTAACCATCCATGGTCGAACAAAAGGCAGGAACCCCAAAACAGATCAAACGCAAGAATTGAAGATGCATCCAGGGAACACATAAAGCAAGAGTTACAGCTCGCCCCGTTTCTTCCAAAGATTACGATGGTTGGCATCTCTGCAGGGGAGTCTGGGATGAGCAAGGTCAATTTAAAGAAGACCATGGAGGATCTAACAAAAGAGTTGGAGCAGGCAGATCAGGAAAATGCAGTTGGTTGCATTAACAGTGAATTTGAAGTCGAAAATAGGGACCCGTTGTTTGTAGCAAATGTGGGTAGTTACGGCTCAGGCTTGGTAGCAAGAAGTCCTGTTCCATCGGTTCGTGGGGAAAACAATTGA 1671 0.4722 MDSPTQPQNPPHHHPLKAAHQFFCSTASNLLSLLPSKTTPFSPKPAPVCFPNPSKICVPLFFASPAPQLPSSESAQSNSASATKGESPESGSAFPKDVRIGGLNTSAKGGGPAFVGQVFSMCDVSGNGIMAVSNHFDIPFISKRMPQRIKKMFATITKSDKNGPVFRFFMDLGDAVRYVKKLNIPSGGVGACRLDLAYGHFMEKPHLFRFVPNEKQVKAANKLLKKIPQNGGRKRIDGVPVFTAQNLDIAIATTDGIKWYTPYFFDKHTLDSILEQSIDHHFHHLIQSRHVQRRRDVIDDNLAAEVLEDNAESLWEPPEVQEVLDEVGHPGIPLSVISKAAEMQLLYAVDRVLLGNRWLRKATGIQPKFPYMVDSFEKRSAASFRRASPSKRFVASPEMGNDNKDTEELGPSDPKLEDNTQRDQGQNSASWFPVWDLFNHPWSNKRQEPQNRSNARIEDASREHIKQELQLAPFLPKITMVGISAGESGMSKVNLKKTMEDLTKELEQADQENAVGCINSEFEVENRDPLFVANVGSYGSGLVARSPVPSVRGENN* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1011 556 MobiDBLite consensus disorder prediction 401 420 - -
Vvi16g1011 556 MobiDBLite consensus disorder prediction 69 88 - -
Vvi16g1011 556 MobiDBLite consensus disorder prediction 69 98 - -
Vvi16g1011 556 Pfam Tic22-like family 208 277 IPR007378 GO:0015031
Vvi16g1011 556 Coils Coil 492 512 - -
Vvi16g1011 556 MobiDBLite consensus disorder prediction 387 427 - -
Vvi16g1011 556 PANTHER OS01G0225300 PROTEIN 1 547 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1011 - - vvi:100242331 1117.45