Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1007 ATGGCTACTCCGCCAGTCGTACCGACCGCCGCCGCCGCCTCCTTCACCCCAGTATTCATCAACACTGCAACTCTCCGATCCATCCTTACACACAAATCGCTAATCCACCACTTCCGCGCGTCTCTTCCCACAGTCACTTCCAGTCTCCACTCCCCACCTCGCCAAAACTACGCCCTTTCCCCCTCTTCCTCTCTCCTCCTCATGCCCTCTTGGTCTTCCTCCTCCTCCTTCCCCTACCTCGGTGTCAAACTCGTCACCTACTTCCCCCAGAACTCCACCCTTGAATTACCGGGAGTGCACGGGAGCTACGTCCTGTTCGATTCTCGAACTGGGCAAACCCTAGCTTCCATGGATGGCACTGAACTGACTCTGTGGAGAACTTCTTGCGTGTCCGGTTTGGCTTCCGAGATTTTGGCCAGAAACGATGTGGGGGTTCTCGTGATGATTGGTTCGGGCGCTCTAGCCCCTCATCTGATCAAAGCCCATCTCACAGCAAAACCCAGTTTGAGAAGAGTGATAATTTGGAATAGAACAGTGGAAAAGGCGAGAAAATTGGCCCAAGAGCTGGAAAACGAAGGAAAGTTTGAGGGTGTTTGTTTTGAGAGCACTGAGTGTTTGGAGGAAGTGGTGGGCATGGGCGATATTGTGAGCTGCGCCACGAATTCTGAGAGCCCTCTGGTCAACGGCGCAAGGTTGAAGGCTGGGGCGCATCTGGATTTAGTCGGGTCGTTCAGGCATTCAATGAGGGAGTGTGATGATGAAGCAATAAAGAGGGGGAGAGTTTTCATCGATAACGAAATGGCATTGGAGGAGGCAGGAGAGCTGGTGGGTGCTTTTGAAAGGGGAGTGATTGGGAAGGGAGAAATTGGGGGTAATTTGGTGGAATTGATAATAGGGGAGAAGGTTGGGAGGAGGGATTCAGAGGAGGTGACAGTGTTCAAATCAGTTGGGTCTGCAGTTGTAGATATTCTGAGTGCTCAACTGGTATATGAGACTTACATCAAAAATGGAGGTGGACTCTAA 1023 0.5171 MATPPVVPTAAAASFTPVFINTATLRSILTHKSLIHHFRASLPTVTSSLHSPPRQNYALSPSSSLLLMPSWSSSSSFPYLGVKLVTYFPQNSTLELPGVHGSYVLFDSRTGQTLASMDGTELTLWRTSCVSGLASEILARNDVGVLVMIGSGALAPHLIKAHLTAKPSLRRVIIWNRTVEKARKLAQELENEGKFEGVCFESTECLEEVVGMGDIVSCATNSESPLVNGARLKAGAHLDLVGSFRHSMRECDDEAIKRGRVFIDNEMALEEAGELVGAFERGVIGKGEIGGNLVELIIGEKVGRRDSEEVTVFKSVGSAVVDILSAQLVYETYIKNGGGL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1007 340 Gene3D ornithine cyclodeaminase, domain 1 48 330 IPR023401 -
Vvi16g1007 340 FunFam Ornithine cyclodeaminase 140 317 - -
Vvi16g1007 340 Coils Coil 172 192 - -
Vvi16g1007 340 PANTHER KETIMINE REDUCTASE MU-CRYSTALLIN 18 338 IPR003462 -
Vvi16g1007 340 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 339 IPR036291 -
Vvi16g1007 340 PIRSF CryM 10 340 IPR003462 -
Vvi16g1007 340 FunFam Protein SAR DEFICIENT 4 44 149 - -
Vvi16g1007 340 Pfam Ornithine cyclodeaminase/mu-crystallin family 34 333 IPR003462 -
Vvi16g1007 340 Gene3D - 140 317 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1007 - - vvi:100259461 628.632