Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0998 ATGACAGGGATCAAGACTGATGAAACTCCATTATTTTTGGCAACAACTTGGAGTATTACAGAGCTTGTGGAAGAAATACTAAAGATTTATCCTCAGGCAGTTGAGCATGTTAACAAAAAAGGAAGGAACATATTACATGTAGCCATTCAATACCGCCAAATGAAGATTTTTGATATGGTCACAAGGAATGATATGCGAGCAAGGAGGCTGTTGCGAGCCACAGACGCGCAAGGGAACTCCTTACTGCATACTGTTTCCAAAAATAGAAAAGGTCTTATCATGGAAACTTCCCAAGGCCCCGCACTCGACTTGCAAGATCAGTTGCTCCTTTTTGAGAAAGTGAAGAAATTAGTTAAATCCGATTTCTTCAGGCTCTTCAACCATAAGAACCAGACTGCTCAAGAGTTATTTGCTGATAACTATTCTAAACTTCATGAGGATTCCAAAAAATGGCTAGAGGAAACCTCTAAAAATTGCACTATTGTGGCTGTTCTTATCGCCACTGTCGCCTTTGCTGCAGCCTACACTGTACCTGGAGGTAATCAACAAAGCAGTGGTATTCCAGTCCTTCTCTCCAATCCCTTCTTCGTGGTTTTCACCTTGGCTGATGTAATCTCCCTTACTTTCGCTTTGACATCGGTAGTTTCGTTTCTCTCAATCATCACATCACCATTTCGATTACAAGACTTCAAGTACTCTCTTCCTCAGAAACTGATGCTGGCTTTTACATTTTTAATCCTTTCTGTAACAATGATGATGGTAGCATTTGCTGCAACCATCATCCTCATGATCCATGATAAGGAAAGTTGGTCAAAAATTGCTCTATACTCGGTTGCATTCCTTCCAGTCCTCGTTTTTGCTCTCTCATATTCAAATCTCTATGCACATCTGGTGAAAGCTTGTTCGCACCTGTTGCAAATTATACAGGAAATTTGTCCTAGGTGTAAGGGTAATCGTCCGCATCGTAATGAATCCCGATGCATGAGTTCCTCCAACCATCCTGATGAATCTCACAGATCCAGTTTCAGGCGCCCTTCTACACCTCAAATTACTGAAGTTTGA 1062 0.4134 MTGIKTDETPLFLATTWSITELVEEILKIYPQAVEHVNKKGRNILHVAIQYRQMKIFDMVTRNDMRARRLLRATDAQGNSLLHTVSKNRKGLIMETSQGPALDLQDQLLLFEKVKKLVKSDFFRLFNHKNQTAQELFADNYSKLHEDSKKWLEETSKNCTIVAVLIATVAFAAAYTVPGGNQQSSGIPVLLSNPFFVVFTLADVISLTFALTSVVSFLSIITSPFRLQDFKYSLPQKLMLAFTFLILSVTMMMVAFAATIILMIHDKESWSKIALYSVAFLPVLVFALSYSNLYAHLVKACSHLLQIIQEICPRCKGNRPHRNESRCMSSSNHPDESHRSSFRRPSTPQITEV* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0998 353 Gene3D - 3 167 IPR036770 -
Vvi16g0998 353 PANTHER CASKIN 8 294 - -
Vvi16g0998 353 MobiDBLite consensus disorder prediction 317 342 - -
Vvi16g0998 353 SUPERFAMILY Ankyrin repeat 7 89 IPR036770 -
Vvi16g0998 353 MobiDBLite consensus disorder prediction 317 353 - -
Vvi16g0998 353 Pfam Domain of unknown function 149 262 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0998 Vvi-Chr16 18215401 18216904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0998 7 271 Miscellaneous Gene Families AT3G12360 24.026 4.85e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0998 - - vvi:100252438 677.552