Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0993 ATGGAGATAAAGAAAATAATCTTGAAGTTGGAGGTATTCGATGACAAAGCCAAGCAGAAGGCCATGAAGAATGTCTCTTCCCTTCCAGGAGTTACTTCAATCTCCGTGGATATGAAGGACAAGAAATTGACTGTAATCGGAGATGTGGATCCAGTATGCATAGTGAGCAAGTTGAGGAAGTTTTGCCGCACAGAGATATTATCAGTTGGACCAGCAAAAGAGCCAGAGAAGAAGAAGGAGGAGCCTAAGAAAGAGGAGCCCAAGAAAGAAGAGAAGAAGGACGCTAAAGAACAATTGGCTGATCTTGTTAAAGCACACCAAGCCTTTTACCCTCAATATGCCCCACACTACTATGTTAGAAGTGTGGAAGAAGACCCAAATGCTTGTGTCATTTGTTAA 399 0.4236 MEIKKIILKLEVFDDKAKQKAMKNVSSLPGVTSISVDMKDKKLTVIGDVDPVCIVSKLRKFCRTEILSVGPAKEPEKKKEEPKKEEPKKEEKKDAKEQLADLVKAHQAFYPQYAPHYYVRSVEEDPNACVIC* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0993 132 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 4 129 - -
Vvi16g0993 132 Gene3D - 1 74 - -
Vvi16g0993 132 SUPERFAMILY HMA, heavy metal-associated domain 11 61 IPR036163 GO:0046872
Vvi16g0993 132 MobiDBLite consensus disorder prediction 71 97 - -
Vvi16g0993 132 ProSiteProfiles Heavy-metal-associated domain profile. 3 70 IPR006121 GO:0046872
Vvi16g0993 132 Pfam Heavy-metal-associated domain 15 60 IPR006121 GO:0046872
Vvi16g0993 132 CDD HMA 23 50 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0993 Vvi-Chr16 18132576 18133672 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0993 - - vvi:100247478 181.03