Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0990 ATGATGCAGAAAATAATTTTGAAGGTGGAGGTATTCGATGACAAAGCCAAGACGAAGGCCTTGAAGAATGTCTCTTGCCTTCCAGGAGTTAGATCAATTTCCATGGATATGAAGGACAAGAAAATGACTGTCATTGGAGATGTGGATCCAGTAAGCATAGTGGGCAGGTTGAGGAAGCTTTGCCACCCAGAGATATTATCAGTTGGACCAGCAAAAAGAGCCAGAGAAGAAGGAGGAACCCAAGAAAGAAGAGAAGGACCCTAA 264 0.4356 MMQKIILKVEVFDDKAKTKALKNVSCLPGVRSISMDMKDKKMTVIGDVDPVSIVGRLRKLCHPEILSVGPAKRAREEGGTQERREGP* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0990 87 Gene3D - 1 73 - -
Vvi16g0990 87 ProSiteProfiles Heavy-metal-associated domain profile. 2 69 IPR006121 GO:0046872
Vvi16g0990 87 Pfam Heavy-metal-associated domain 11 59 IPR006121 GO:0046872
Vvi16g0990 87 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 77 - -
Vvi16g0990 87 SUPERFAMILY HMA, heavy metal-associated domain 1 62 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0990 Vvi-Chr16 18108464 18109397 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0990 - - vvi:100252599 128.257