Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0988 ATGTCAACTTTTTGTAGAAATGTCACAGAAACGACACCGTTTCAGTTCTCCCGAGCATCTGAACGGCGTCGTTTAGTGTGGCTTCTGCCACCTTGCCACGAGTCTCCGCGTCTGACTTTTGCTCAGCATGGGCCTGGGTTCGCTCGGTTTTCTTCGCTCTCAAATCACTACAAATACGACGCCTTGGCTCCTGCGAACTTCGCCAAATTCATCAAACTTCATCTCCTTCAACTTCTCATTCTTCAGTCTTCTTCTTCTTCTTCCTCTGTTCAGGCTTTCGTCTCTTACATTTTCTCATACTTCAATGGAAAAGAAGGAGTTGAATCAGTGTCCATGGACATGAAGGAAAAGAAACTGACAGTAGTTGGGCATGTTGGTATAATAAATATGGTGAAACAATTGAGAAAGCTTTGTCACACAGATTTAGTCTTGGTTGGATCACCAGTAGAAGCAGCAGAAAATAAGGAGGGGCCCAAGGAGCCCAAGAAACCAAAAGAGAAAAAAGACAGTAAAGATGCTTCCTATGGGAATCCTGGCTATGCCACATTTGATCATTATGATCCAGTGTCTGGTCTGGTCTGGTATCATTTCCATAACTCAATGGAGACGAAGAAAATAATCTTGAAGTTGGAGGTATTCGATGACAAAGCCAAGCGGAAGGCCATGAGGAATGTCTCTTGCCTTCTAGGAGTTACTTCAATCTCCGTGGATATGAAGGACAAGAAATTGACTGTAATCGGAGATGTGGATCCAGTATGCATAGTGAGCAAGTTGAGGAAGTTTTGCCGCACAGAGATATTATCAGTTGGACCAGCAAAAGAGCCAGAGAAGAAGAAGGAGCCTAAGAAAGAGGAGCCCAAGAAAGAAGAGAAGGACCCTAAAGATCAATGGCCTGATCTTGTTAAAGCATGCCAAGCCTATTGCCCTTGCTATGCCCCACACTACTGTTATATTAGAAGTGTGGAAGAAGACCCAAATGCTTGTGTCATTTGTTAA 996 0.4367 MSTFCRNVTETTPFQFSRASERRRLVWLLPPCHESPRLTFAQHGPGFARFSSLSNHYKYDALAPANFAKFIKLHLLQLLILQSSSSSSSVQAFVSYIFSYFNGKEGVESVSMDMKEKKLTVVGHVGIINMVKQLRKLCHTDLVLVGSPVEAAENKEGPKEPKKPKEKKDSKDASYGNPGYATFDHYDPVSGLVWYHFHNSMETKKIILKLEVFDDKAKRKAMRNVSCLLGVTSISVDMKDKKLTVIGDVDPVCIVSKLRKFCRTEILSVGPAKEPEKKKEPKKEEPKKEEKDPKDQWPDLVKACQAYCPCYAPHYCYIRSVEEDPNACVIC* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0988 331 ProSiteProfiles Heavy-metal-associated domain profile. 203 270 IPR006121 GO:0046872
Vvi16g0988 331 Gene3D - 199 274 - -
Vvi16g0988 331 Gene3D - 75 146 - -
Vvi16g0988 331 MobiDBLite consensus disorder prediction 273 295 - -
Vvi16g0988 331 MobiDBLite consensus disorder prediction 153 173 - -
Vvi16g0988 331 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 90 170 - -
Vvi16g0988 331 MobiDBLite consensus disorder prediction 153 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0988 Vvi-Chr16 18082834 18085976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0988 - - vvi:100247478 225.713