Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0986 ATGGACTCAGAAAATCAAGATCGGTGTTCCCCGGGAAGGTCGGAACCGGATGAGACTTCTGAAGGAACTCAAAAACAGTCAAGGATTTCATATGCAAGGGATTTTCTTTTATCTTTAGCTGAGCTAGATGAATGCAAAAATTTACCAAGTGGATTTGATTCATCCCTCCTAAGTGGCATGTCAGAATGTCAAAGAGTAGCTTCTAATCAGTCATTGCATAGTTTCAAGAGCAGTGTATATGCTTCATCACAGTCCAACCATAATTCAGATTCTGGACAGCAGAACGTTAAACAGTATGGACGTCCTTGGCAAAAATTTCAGTATGATGGGGTTTTAGGAAATGTTGCTTTTCCAAGAGTATATGCAGGTGCATCTAGGGCTTCAGCTCCAACAGCTCAAGGAAGTGGTCTTTATCAACTCAATAGACATAAAGAACCATACTGTCCTTTACGCCCTTTTGAGTTTGTATGTGGCTTAGGGAAGCAGAATATAGACTTGTACAATGATGAAACCTTTGGCTCTGCTGAGTATCTAGATCATGAGACAGCAGAGGAAGAAAAGAGAAGAGTTTCATTTGAGTTGATGAGGAAGGAACAGGAAAAACCAATTCAAGAGCAGAAGAAACAAAATGATGATGGACATAAAGAAAATTTTGACCCAGATAATAGCGCACTACTCAAGGATTCTGCAAATGATAATAGTATAGTGAATACAATCAATGGATCAGAGGAGTGTCTGATACTGCCAGCTTCAACTACTGATCCTGCTGAGGTTTCTCTTCCTGCACGGCTTCCTGCATCCAGGCCTGTTATACCCCCAGGTTTTTCCAACAAGATCCTGGAGAAGAATCTTGGAACAAAACCCTTAGCCCATTCCCCTTTATCAGAGAAGAAACCAGCTGTAGTTATCTTGTCTAGTAAAGAGAAAGGTGGAACCCAAGTGTCTGGAGTGAAGACAGCAGAAGTCAATGATCGCAACTTTCCAAACTTTTTTTCTGAAATAAATCAACTTACCTGCAAACCTATAATACCTACCTTGACTTTTGGTACAGAGGGAATCTCTGGGCAGTTAGTTAGTTGCAATAAACCTTCTGTTACTCCAGCAGTTCTTACATGTGAGGACCTTGAACAATCTATTCTCTCTGATATGAAGGAAAATAATTCAACTCAGAATCATTCTGTGCAAAACTGGAGTCTTTATGCAAAGGATGACCAACCAAATTCTGCCAATGATAATGGCTCATCTCAGTATCTTCTTTCTTTATTACAAAACGAGGTGAGCCTGAAAGATCTGGCGGCAGCTCCCAATAAGTTTTCTCATCCAGCTGTTGATAAATGTGGTAGATCCATTGTGATTAGTTCTGAAGACATGGTGGCCTCAGAGTTTTCTAAGCTGGGTGAGTTTAATTTGATAGAGGGAACTCGAACAGGCTCTGAAGGCTTTGATGGAAAAGATGGTTCAACAATTGAAATATGTCTGCCTGAAGAGGACAGTTTGATTACAGTGGATGATCCCATAATCCCTCAACACTCCGTGTTTAAGCCCACTTGGAATTCACTTGAACCAAATTTTACTACACCAGCTGATAATATTGCTGTACAACTAGCAGATCTAAATCATGTCCTCGGTGATGAAAGATCTGCCATACCAAGTTTGGAAGGTTCACCTTTCCTTCGTTCTTTGTGTGGCATAATGGGCTCAGAGACTCCTTATCATGATCTGCATGCACAGAAATCTTACCCACAATTTCAACACTCTCGAATGGATCCACAGAGGCCATCTAATTTTCTGTTAGATTCTCCTCAACTGAGTTCTCAAACCAGGTCCATGGGTTGGAAAAACTATCGCCATAGTCCTCGAACCCCCCATTACACCCCTGAGAATGTTCATCCCCAATCTTTTGCCTACACTCCTGCAGCGCCAACAAGGTTTGATTATCCAGTTCATAATTCATTACAACACGTGCCAGATGGTTTTCCTGTTAATCAACCTAAGTTGAATTTGCAAAGGTTTCCCCAACATCATCAGCAACTTAGGTATGGGGGCTTTGGAGTGGCAAATACAGCTCCTGCTGTTCGTGGAAAAAGCAATTCAGGTGCATTCCATAGGCCCATTGAGATGGTATCAAGAGCAAGGCAGAGGTACCCTTATGCTGTGGATGAGACATTGAATATACCCATTGAGATGCACCCCTTTGCCATGGGTGCAACACTCAATAAGCCCATGGAAACAGAAAAGAGTGCAAAGGAGATGCACCCTTTCGCTGTGGATGCGGCATTCAACATGCCCATTGAGATGGAAAGGAGAGGGAGGCAGATGCGCCCTCTTACTCCCCGTGTCCGTGGTCGAGGGACCTATAACAGGCAGTTCGATATGGGATTTTGGAATGGACAGTAG 2397 0.4247 MDSENQDRCSPGRSEPDETSEGTQKQSRISYARDFLLSLAELDECKNLPSGFDSSLLSGMSECQRVASNQSLHSFKSSVYASSQSNHNSDSGQQNVKQYGRPWQKFQYDGVLGNVAFPRVYAGASRASAPTAQGSGLYQLNRHKEPYCPLRPFEFVCGLGKQNIDLYNDETFGSAEYLDHETAEEEKRRVSFELMRKEQEKPIQEQKKQNDDGHKENFDPDNSALLKDSANDNSIVNTINGSEECLILPASTTDPAEVSLPARLPASRPVIPPGFSNKILEKNLGTKPLAHSPLSEKKPAVVILSSKEKGGTQVSGVKTAEVNDRNFPNFFSEINQLTCKPIIPTLTFGTEGISGQLVSCNKPSVTPAVLTCEDLEQSILSDMKENNSTQNHSVQNWSLYAKDDQPNSANDNGSSQYLLSLLQNEVSLKDLAAAPNKFSHPAVDKCGRSIVISSEDMVASEFSKLGEFNLIEGTRTGSEGFDGKDGSTIEICLPEEDSLITVDDPIIPQHSVFKPTWNSLEPNFTTPADNIAVQLADLNHVLGDERSAIPSLEGSPFLRSLCGIMGSETPYHDLHAQKSYPQFQHSRMDPQRPSNFLLDSPQLSSQTRSMGWKNYRHSPRTPHYTPENVHPQSFAYTPAAPTRFDYPVHNSLQHVPDGFPVNQPKLNLQRFPQHHQQLRYGGFGVANTAPAVRGKSNSGAFHRPIEMVSRARQRYPYAVDETLNIPIEMHPFAMGATLNKPMETEKSAKEMHPFAVDAAFNMPIEMERRGRQMRPLTPRVRGRGTYNRQFDMGFWNGQ* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0986 798 PANTHER CHORISMATE SYNTHASE 1 306 - -
Vvi16g0986 798 MobiDBLite consensus disorder prediction 197 222 - -
Vvi16g0986 798 MobiDBLite consensus disorder prediction 197 229 - -
Vvi16g0986 798 Coils Coil 180 200 - -
Vvi16g0986 798 MobiDBLite consensus disorder prediction 1 22 - -
Vvi16g0986 798 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0986 Vvi-Chr16 18064705 18071828 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0986 - - vvi:104882190 1599.72