Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0974 ATGGAGGTGGTACTCCACATCTATGACGTCACTAATAGTGGCTCAGAGAAGACGAACAACACCATTGTTCAGATCAACAAGATCTTCAAGGACGGTATTGGCCTCGGTGGCATTTTCCACAGCGCTGTGCAGGTTTATGGAGATGATGAATGGTCATTTGGATTCTGTGAACAAGGAACTGGAGTTTTTAGTTGCCCTGCTAGCAAGAATCCAATGTACACATATCGTGAATGCATTGTACTTGGAAGAACAAACTTTTCAATCTTCAAGGTCAATCAAATCCTGAGAGAACTTAGTAGAGAGTGGCCTGGAAGCTCATACGACTTGTTAGCAAAAAATTGCAATCACTTCTGTGATGAGTTATGTGAAAAACTTGGTGTGCCGAAGCTTCCTGGTTGGGTAAACCGGTTCGCCAATGCTGGTGATGCTGCCATGGAAGTAGCAGGAAATACAGCATTGCGGTTTAGACAAGCCAAGACAGAGATCGTAACAGCCAGCAAAGTGGCATACCGATTCCTTTTGGGTGTTACTTCCAACTCAGCAGTCACTCCAGAATCCCCAAGCAATTCGAACAGGGCTACTCCAAGATTCCAAGGTGCTTGGTTTAAAAGCCTTGTTCCTTCCGGTGCCACCGGTGCCAGACCATCCAGTAGTTCAGAAATTGAAAATCAGGAGGATGTTGTACGGCAACAACCCCTACATGAGGCAGAGGCACCGCTGCGACAGACTTAA 732 0.4604 MEVVLHIYDVTNSGSEKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQGTGVFSCPASKNPMYTYRECIVLGRTNFSIFKVNQILRELSREWPGSSYDLLAKNCNHFCDELCEKLGVPKLPGWVNRFANAGDAAMEVAGNTALRFRQAKTEIVTASKVAYRFLLGVTSNSAVTPESPSNSNRATPRFQGAWFKSLVPSGATGARPSSSSEIENQEDVVRQQPLHEAEAPLRQT* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0974 243 MobiDBLite consensus disorder prediction 206 243 - -
Vvi16g0974 243 MobiDBLite consensus disorder prediction 210 226 - -
Vvi16g0974 243 Gene3D PPPDE domains 1 167 IPR042266 -
Vvi16g0974 243 SMART DUF862_2a 1 156 IPR008580 GO:0008233
Vvi16g0974 243 Pfam PPPDE putative peptidase domain 2 145 IPR008580 GO:0008233
Vvi16g0974 243 ProSiteProfiles PPPDE domain profile. 1 149 IPR008580 GO:0008233
Vvi16g0974 243 PANTHER DESUMOYLATING ISOPEPTIDASE 2 215 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0974 Vvi-Chr16 17979946 17984708 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0974 - - vvi:100255969 497.664