Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0969 ATGGCGTCGAAGTTTCTGACTCTCCGCGCTCCGCTGTCGATTCCACAACCGGTTACGTGTTCCCGCCAGAATTTCCCAACCGTCTCTACGAGCAGTTGTTCTACTGTTGAAGATCCATCGCTGTGGCGTAGCAAGAAGCAAACGCAGCTCTCGCCTCTGATTTTCCCTAAAAGTTCTGATTCGATTAGATCCGTGACCGTCAGATCCAGTTTGACTTTCCCTATCATTTCTCCGCAAGATCAATGGGGCACTTGGACTGCTCTCTTCGCTACCGGCGCTTTCGGTATCTGGTCAGAAAAAACGAAGATTGGGAGTGCGCTGAGTGGTGCCTTAGTGAGTACTTTGGTTGGACTTGCAGCTAGTAATTTAGGGATTATTTCTTGCGAAGCGCCAGCATATTCGGTTGTGTTGAATTTTCTGTTGCCACTGGCAGTCCCACTGCTGTTGTTTAGAGCAGACTTGCGTCGTGTGATACAATCTACTGGGGCACTGCTCATGGCTTTTTTGATTGGATCAGTTGCAACAACAATTGGGACTGTCGTGGCATTTCTGATGGTTCCAATGCGATCACTTGGTCAGGACAGTTGGAAGATAGCAGCTGCACTCATGGGCAGACATATTGGTGGAGCTGTCAATTATGTTGCCATTTCAGAAGCTCTTGGTGTTTCTCGATCAGTTTTAGCTGCAGGTCTAGCTGCAGACAATGTTATTTGCGCAGTCTATTTTACAACATTGTTTGCACTAGCTTCAAAAATACCCCCTGAGGATTCAACATCTGCAAATGGAATGAATGAGCAGCCCGAGCCTGGCAACAAACCTCCTGTGCTACTGACTGCTACCGCCCTTGCTGTATCCTTTGCTATCTGCAAGGCTGGCATTTTCCTCACAAAATATTTTGGAATTCAAGGAGGTAGTCTTCCAGCCATTACAGCAATAGTTGTTATTTTAGCAACTGCATTTCCAAAGCAGTTTAGTCTCCTTGCACCTGCTGGTGAGACTATGGCAATGATTCTGATGCAGGTATTTTTTACAGTGGTGGGAGCAAGCGGGAACATAGGGAATGTCATGAACACAGCTCCCAGTATTTTCATGTTTGCTCTGGTCCAGATTGCGGTCCATCTTGCTGTGATCCTGGGACTGGGAAAGCTATTCCGCTTTGATCTAAAGCTGTTGCTGATAGCATCAAATGCCAATGTTGGAGGCCCTACAACAGCCTGCGGAATGGCCACAGCCAAAGGGTGGAGTTCCTTGGTTGTTCCTGGGATTCTTGCTGGCATATTCGGTATCGCAATTGCAACTTTTCTGGGCATTGTCTTTGGAGTAACAGTCCTTAAATTCATGTAA 1344 0.4695 MASKFLTLRAPLSIPQPVTCSRQNFPTVSTSSCSTVEDPSLWRSKKQTQLSPLIFPKSSDSIRSVTVRSSLTFPIISPQDQWGTWTALFATGAFGIWSEKTKIGSALSGALVSTLVGLAASNLGIISCEAPAYSVVLNFLLPLAVPLLLFRADLRRVIQSTGALLMAFLIGSVATTIGTVVAFLMVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISEALGVSRSVLAAGLAADNVICAVYFTTLFALASKIPPEDSTSANGMNEQPEPGNKPPVLLTATALAVSFAICKAGIFLTKYFGIQGGSLPAITAIVVILATAFPKQFSLLAPAGETMAMILMQVFFTVVGASGNIGNVMNTAPSIFMFALVQIAVHLAVILGLGKLFRFDLKLLLIASNANVGGPTTACGMATAKGWSSLVVPGILAGIFGIAIATFLGIVFGVTVLKFM* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0969 447 PANTHER PROTEIN, PUTATIVE (DUF819)-RELATED 39 447 IPR008537 -
Vvi16g0969 447 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Vvi16g0969 447 Pfam Protein of unknown function (DUF819) 86 446 IPR008537 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0969 Vvi-Chr16 17931103 17936323 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0969 - - vvi:100264478 818.15