Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0968 ATGTCGTCGTCATCGTTACCGTCACCATTTCCACTACTCAACGCTATCTCTCCCTCACCGTTGCTCCGGCCGTTACTTCCGCCGTCATCCATCTCCCATCGCAATAGCTACTCCAACTGCTCTACCTGCAAGCCTCTGATTTTCCATGCAAACCAAAACCGGCACCGTTTTGTGAAGGTTCGGTCACAGCTGAGTGGCCCTATCATCTCTCCGGAAGACCATTGGGGTACATGGACCGCACTCTTCGCCACTGGTGCTTTCGGCCTCTGGTCAGAGAAGACGAAGATTGGGAGCATGGTGAGTGCTGCTCTGGTTAGCATTTTGGTTGGGATGGCCGCAAGTAATCTTGGAATTATTCCTTATGATGCACCGGCATATTCGATTGTGATGGAGTTTTTGCTGCCTATTACTCTTCCACTACTGTTGTTTAGAGCAGACATGCGTCAAGTGATGCAGTCGACTGGGACATTGCTCTTGGCTTTCTTGCTTGGATCAGTTGCAACAATTGCTGGAACTCTTGTGGCATTTCTGGTAGTGCCTATGCGATCACTGGGTCAAGATAGTTGGAAAATAGCTGCTGCCCTCATGGGTAGTTATATTGGTGGAGCTGTTAATTATGTTGCAATTTCAAAGGCTCTTGGTGTTTCTCCATCAGTTTTGGCTGCAGGAATAGCGGCAGATAATGTTATTTGTGCTCTGTATTTTATGATCTTGTTTGCATTAGCTTCTAAAATACCTCCCGAGACTCCAAAATTAACCAATGATGTTGCACTGAATATGGAGTCTGATTCTGGAAGCAAGCTCCCTGTGCTACAGACAGCTACAGCTCTTGCTGTATCTTTTGTTATCTGCCTGTCTGCCACATATCTAACAAAATTGTTTGGAATTCAAGGAGGCACCCTACCAAGCATAACAGCAATTGTTGTTGTTTTAGCAACTGCCCTTCCAATGTATTTTGGTTACCTTGCACCTGCTGGTGATACTATTGCTGTGGTTTTGATGCAGGTATTTTTTGCTGTAGTGGGTGCTAGTGGGAGCATATGGAATGTCATCAATACTGCTCCCAGTATTTTCATGTTTGCTCTTGTTCAAGTAATGGTCCATCTTGCTGTGATCCTTGGATTGGGGAAGCTATTTCGCTTAGACTTAAAGCTGTTACTTTTGGCATCAAATGCCAATATTGGAGGTCCTACTACAGCATGTGGAATGGCCACAGCCAAAGGATGGAGCTCTTTGGTTGTTCCTGGGATTCTTGCAGGCATTTTTGGAATCTCTATTGCAACTTTTCTTGGCATTGGTTTTGGAGTCATGGTTCTTAGACACATGAGCCTTTCAGGTCATAGACGGAAGTTGGAATTGTACTTGATGATGGATTCTGATTTAGTGAGGGAATCTCCTGCCATTGCTACTCCTAGTTATGAAGGGAAGAAGAAGAAGAAGAGCAGGCACACAGTCACAAGGATGATGTTCCTTGTTGTATTTCTTGGGTGGCTTATGGTTTGGGTTTTGTTGCCTACAAAGGTGTATAAACAACAATGGACTCCCAAGCTAAACAGCAAGCTCAATTCCACATATTTTGGAGAACAAGGAACAAATCTTTTGCTATTCACATTCCCTATGATGCTCATAGCTGCTGTGGGTTGTGTTTATCTCCACTTTCAGAAGAAAAAAGGAAATTCTTTCTCTAGGAGCATCAGCGCAAGCCATCGTCTGGCCTTCTGGAAAAAACCAGTGCTTGTGATGGCTCCTCTTGGAATTGTTTCAGCCATGGAGCTTGTTTTTGCTGCCATGTTCATCATGCTCTTAATCTGGTCTCTTGCCAATTACTTATATGTCAGCTTTGGTCACCTCCATATGCATAAACAAGGGGAGAAAGTGTGGGAAGCTAAGTTTCGTAGCGTATCTCTGAGACTTGGGTATATTGGAAACTTGTGCTGGGCATTTTTGTTTTTTCCTGTGACTCGGGGATCTTCAATTCTGCCTCTTGTTGGGCTCACATCAGAGTCTAGCATCAAGTATCATATTTGGCTTGGGCATCTCTCCATGGTCCTTTTTGCTGCACATAGCATAGGTTTTGTCATCTACTGGGCTATGACCAATCAAATGGCTGAGATGCTAGAATGGAGTAAAACTTATGTATCAAATGTAGCTGGAGAGATTGCCTTTTTATTTGCATTAATAATGTGGGCAACAAGCTTTCCTCGGGTGAGGCGAAAAATGTTTGAAGTTTTCTTCTACACCCACCACATATACACTCTCTACATCTTCTTCTATGTGTTGCATGTTGGCACTGCCTACTTCTGCATGATCCTTCCTGGGATCTTTCTATTCATTATCGACCGGTACTTAAGATTCTTACAGTCACGGCAACGAGCTAGGCTGGTTTCAGCACGCATCTTACCCTCTGAAGCTGTTGAATTGACCTTCTCCAAGAGTCTAGGACTAACTTACAACCCCACTAGCATCTTATTTGTGAATGTGCCTAGCATTTCCAAGCTGCAGTGGCACCCTTTTACTGTGACTTCAAATTGTAATAGTGAGCCAGATAAACTAAGCATAGTCATCAAAACTGAAGGAAGCTGGTCTCAGAAGCTTTACAACAAACTTTCTTCACTTCCTGCTGTAGACCGCTTTGATGTCTCTGTTGAAGGACCATATGGGCCTACTTCATCTCATTTCCTAAGGCACGAGTCGCTAGTAATGGTGAGTGGAGGCAGCGGTGTTGCTCCTTTCATCTCCATAATCCGCGAGATCATATTCCAAAGCACCAAACCAAACTGCAAGGTTCCAGGAATCCTCCTCATTTGTGCCTTCAAGAACTCTGCTGATCTCACCATGCTAGACCTCTTGCTTCCCGTCTCTGGCATGACCTCGGACATTTCACAGATACAGCTGCAAATAGAAGCCTATATCACTAGAGAGAAAGAGCAGCCCGCCACAGACACCCAGAAGCTCCTCCGAACAATATGGTTCAAACCAAACACATCAGATGCTCCCATTTCCGCAGCCCTTGGTCCAAACAGCTGGCTCTGGCTATGTGCAATAATCATATCTTCCTTCATCATGTTCCTCCTCTTCTTGGGCATTCTCACGCGTTACTACATTTACCCTATTGAACATGGCAGTGATGAAATTTATCATTTCTCCTTTAGATGTCTCTGGGACATGTTCTTCCCATGTGCTGCCATTTTCTTAGCTGCCAGCGGCGTTTTTCTTTGGCATAAGAAACAAGCCACCATGGAAGGGAAGCAAATCCAGAACATGGAAGTGCCAACACCGGTAGCCTCACCAGGGTTATGGCTATGCGGCAGTACAGATAGAGAGCTCGAAAGCCTCCCCCACCAGTCCCTTGTCGAAGCTACCAAGGTGCATTTTGGAGCAAGACCCGATCTCAAGAAGATACTTTTTGATTGCAAAGGATCGGATGTTGGAGTTTTGGTATGCGGGCCGAGGAAGATGCGACATGAGGTTGCAAGAATTTGTTCATCTGGTCTTGCTGATAATCTGCATTTTGAGTCCATTAGCTTTAACTGGTGA 3537 0.4481 MSSSSLPSPFPLLNAISPSPLLRPLLPPSSISHRNSYSNCSTCKPLIFHANQNRHRFVKVRSQLSGPIISPEDHWGTWTALFATGAFGLWSEKTKIGSMVSAALVSILVGMAASNLGIIPYDAPAYSIVMEFLLPITLPLLLFRADMRQVMQSTGTLLLAFLLGSVATIAGTLVAFLVVPMRSLGQDSWKIAAALMGSYIGGAVNYVAISKALGVSPSVLAAGIAADNVICALYFMILFALASKIPPETPKLTNDVALNMESDSGSKLPVLQTATALAVSFVICLSATYLTKLFGIQGGTLPSITAIVVVLATALPMYFGYLAPAGDTIAVVLMQVFFAVVGASGSIWNVINTAPSIFMFALVQVMVHLAVILGLGKLFRLDLKLLLLASNANIGGPTTACGMATAKGWSSLVVPGILAGIFGISIATFLGIGFGVMVLRHMSLSGHRRKLELYLMMDSDLVRESPAIATPSYEGKKKKKSRHTVTRMMFLVVFLGWLMVWVLLPTKVYKQQWTPKLNSKLNSTYFGEQGTNLLLFTFPMMLIAAVGCVYLHFQKKKGNSFSRSISASHRLAFWKKPVLVMAPLGIVSAMELVFAAMFIMLLIWSLANYLYVSFGHLHMHKQGEKVWEAKFRSVSLRLGYIGNLCWAFLFFPVTRGSSILPLVGLTSESSIKYHIWLGHLSMVLFAAHSIGFVIYWAMTNQMAEMLEWSKTYVSNVAGEIAFLFALIMWATSFPRVRRKMFEVFFYTHHIYTLYIFFYVLHVGTAYFCMILPGIFLFIIDRYLRFLQSRQRARLVSARILPSEAVELTFSKSLGLTYNPTSILFVNVPSISKLQWHPFTVTSNCNSEPDKLSIVIKTEGSWSQKLYNKLSSLPAVDRFDVSVEGPYGPTSSHFLRHESLVMVSGGSGVAPFISIIREIIFQSTKPNCKVPGILLICAFKNSADLTMLDLLLPVSGMTSDISQIQLQIEAYITREKEQPATDTQKLLRTIWFKPNTSDAPISAALGPNSWLWLCAIIISSFIMFLLFLGILTRYYIYPIEHGSDEIYHFSFRCLWDMFFPCAAIFLAASGVFLWHKKQATMEGKQIQNMEVPTPVASPGLWLCGSTDRELESLPHQSLVEATKVHFGARPDLKKILFDCKGSDVGVLVCGPRKMRHEVARICSSGLADNLHFESISFNW* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0968 1178 FunFam Ferric reduction oxidase 3 885 1003 - -
Vvi16g0968 1178 Pfam Protein of unknown function (DUF819) 79 439 IPR008537 -
Vvi16g0968 1178 SFLD Ferric Reductase Domain 505 1178 - -
Vvi16g0968 1178 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 897 1173 IPR039261 -
Vvi16g0968 1178 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 787 892 IPR017927 GO:0016491
Vvi16g0968 1178 Gene3D - 880 1005 IPR039261 -
Vvi16g0968 1178 Gene3D - 1076 1176 IPR039261 -
Vvi16g0968 1178 Pfam Ferric reductase NAD binding domain 896 1162 IPR013121 GO:0016491
Vvi16g0968 1178 Pfam FAD-binding domain 793 890 IPR013112 GO:0016491
Vvi16g0968 1178 FunFam Ferric reduction oxidase 5 1067 1177 - -
Vvi16g0968 1178 Pfam Ferric reductase like transmembrane component 639 756 IPR013130 -
Vvi16g0968 1178 CDD NOX_Duox_like_FAD_NADP 794 973 - -
Vvi16g0968 1178 PANTHER PROTEIN, PUTATIVE (DUF819)-RELATED 24 442 IPR008537 -
Vvi16g0968 1178 SFLD Ferric reductase subgroup (FRE) 474 1178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0968 Vvi-Chr16 17920170 17930273 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0968 484 1178 Miscellaneous Gene Families AT5G23980 59.402 0.0 881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0968 K00521 - vvi:100247332 1459.51