Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0967 ATGGATCCAAAGGTGATAAGAGGAACGTCCTCTTGGCTAGGAGTCTATGCTCTTCGATCGGTGATCAGGTTGTTTGTAATGGCAGCCTTTCTTGGCTACATTATGGTATGGATCATGATGCCCACCAACACGTTTTGGCTGCATTGGTTGCCTGACATCCATGCAAAAACTGATTCCAAGTATTTTGGACAACAAGGTGCCAACCTCCTCGTTTATACGTTTCCGGTCCTACTCATTGCTACTTTGGGCTGTTTATATCTCCACTTAGGAAAGAAATGTGTTGATCATGACATAGATGAAAATTCTCGATGGGCTTTATGGAAACGACCTGTGCTCGTGAAGGGCACTCTGGGGATTGTTTCTTGGATAGAGCTATCCTTTTTATCCATGTTCTTTGTCCTCTTGGTTTGGTCTGTTTCAGCTTATTTGCACGGTATGTTCGCAAATATCACCCGCCAATCAGCAGCAAAGATGGGAGTGCAAGTGTGGGAAGCCAAGTTAGAAAGTGCAGCTCTGATGCTAGGCCTTGTTGGGAACATTTGCCTAGCCTTTCTGTTCTTTCCAGTGACACGAGGATCTTCTGTTTTGCGGCTCATTGGCCTTACATCTGAGTCAAGCATCAAATATCATATCTGGCTCGGTCACACTGTCATGACGCTCTTCACTGCCCATGGCTTATGTTACATTATCTTTTGGGCTGCAACACATCAAAGTTCAGAGCTGCTCACATGGGATGAGATCGGGGTCTCCAATGTGGCTGGAGAGCTCGCCTTACTATCTGGATTAGCCATGTGGGCAACAAGCTTCCCTCATATAAGGCAGAAGATCTTTGAGCTCTTCTTTTATACCCATCATCTGTATGTCCTTTTCATCGTCTTTTTCATGTTACATGTGGGCATCTCCTACTCCTGCATCATGCTTCCAGGTTTCTACCTTTTCTTGATAGACCGGTACTTGCGATTCTTACAATCCCAACAAAGGGTTCGCTTGGTTGCAGCCCGCCTTTTACCTTGTGAAGCGGTTGAGTTGAACTTCTCTAAAGCATCAGGGCTGAACTATACTCCAACAAGTACCCTCTTTATAAATGTGCCTAGCATTTCCAAGCTGCAATGGCATCCTTTTACAATCACCTCAAACAGTAATACAGATCCTGAGAAGGTAAGTGTTGTCATCAAAAGTGAAGGAAGTTGGTCCAGCACATTGTATTGTAAGCTATCATCCCCCTCACTGATAGAGCACCTTGAGGTCAGCATTGAAGGGCCCTATGGACCTACTTCAACCAATTTTCTAAGGCATGACATGCTTGTGATGGTGAGTGGAGGAAGTGGCATTACTCCTTTCATCTCCATCATCCGTGAGCTCCTCTTCAGAGCCAACAGAATGAGCAGCAAGACTCCAAGGGTTCTTCTCGTTTCTGCTTTCAAGAAATCTCTGGATGTCGCCATGCTAGACCTCCTCCTCCCGGTTTCAGGCACAACCTCTGATATTTCTCAGTTGCAATTACAAATTGAAGTGTATGTAACAAGAGAAACAGAGCCCACAAGAGAAAACCAGAAACTCCTTAGAACCATATGGTTCAACTTCAAGCCCAACACATTGGATGTACCAGTTTCTGCCATTTTAGGCCCAAATAGCTGGCTGTGGCTTGGAACAATCATGTCATCTTCTTTCGTCATTTTTCTTCTGATAATCGGCATTCTTACACGATACTATATACAACCAATTGACCATAACACTAACATGATCTACTCCTACTCTGCAAGATCTGCTCTAAACATGTTACTCATGTGTGTCTCCATATCCATGCCTGCAACTGCAGCTTTTCTTTGGAACAAAAAACAGGCAACCAAGGAAATGAGGCAGATCCAAAACACGGCCGCACCAACACCAACCACATCACCAGGCTCATGGTTTTACAATGCAGATAGAGAGTTGGAAGCCTTTCCACACCAGTCTTTTGTCGAAGCAACCAAGGTGCACTATGGTGAAAGACCCAACCTAAGAAGAATAATATCTGAGTGTGCAGGATCTAGCGTTGGAGTTCTTGTCAGTGGCCCAAGAAAGATGAGGCAAGAAGTTGCAGCTATCTGTTCATCTGGTTTGGCAGATAACCTACATTTTGAGTCCATTAGCTTTAACTGGTGA 2145 0.4457 MDPKVIRGTSSWLGVYALRSVIRLFVMAAFLGYIMVWIMMPTNTFWLHWLPDIHAKTDSKYFGQQGANLLVYTFPVLLIATLGCLYLHLGKKCVDHDIDENSRWALWKRPVLVKGTLGIVSWIELSFLSMFFVLLVWSVSAYLHGMFANITRQSAAKMGVQVWEAKLESAALMLGLVGNICLAFLFFPVTRGSSVLRLIGLTSESSIKYHIWLGHTVMTLFTAHGLCYIIFWAATHQSSELLTWDEIGVSNVAGELALLSGLAMWATSFPHIRQKIFELFFYTHHLYVLFIVFFMLHVGISYSCIMLPGFYLFLIDRYLRFLQSQQRVRLVAARLLPCEAVELNFSKASGLNYTPTSTLFINVPSISKLQWHPFTITSNSNTDPEKVSVVIKSEGSWSSTLYCKLSSPSLIEHLEVSIEGPYGPTSTNFLRHDMLVMVSGGSGITPFISIIRELLFRANRMSSKTPRVLLVSAFKKSLDVAMLDLLLPVSGTTSDISQLQLQIEVYVTRETEPTRENQKLLRTIWFNFKPNTLDVPVSAILGPNSWLWLGTIMSSSFVIFLLIIGILTRYYIQPIDHNTNMIYSYSARSALNMLLMCVSISMPATAAFLWNKKQATKEMRQIQNTAAPTPTTSPGSWFYNADRELEAFPHQSFVEATKVHYGERPNLRRIISECAGSSVGVLVSGPRKMRQEVAAICSSGLADNLHFESISFNW* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0967 714 Pfam Ferric reductase NAD binding domain 432 698 IPR013121 GO:0016491
Vvi16g0967 714 SFLD Ferric Reductase Domain 48 714 - -
Vvi16g0967 714 Gene3D - 596 712 IPR039261 -
Vvi16g0967 714 Gene3D - 416 538 IPR039261 -
Vvi16g0967 714 PANTHER NADPH OXIDASE 24 712 - -
Vvi16g0967 714 Pfam FAD-binding domain 327 426 IPR013112 GO:0016491
Vvi16g0967 714 SFLD Ferric reductase subgroup (FRE) 24 714 - -
Vvi16g0967 714 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 323 428 IPR017927 GO:0016491
Vvi16g0967 714 CDD NOX_Duox_like_FAD_NADP 333 509 - -
Vvi16g0967 714 PRINTS Cytochrome B5 reductase signature 351 358 - -
Vvi16g0967 714 PRINTS Cytochrome B5 reductase signature 436 455 - -
Vvi16g0967 714 Pfam Ferric reductase like transmembrane component 174 294 IPR013130 -
Vvi16g0967 714 FunFam Ferric reduction oxidase 3 421 540 - -
Vvi16g0967 714 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 416 517 IPR039261 -
Vvi16g0967 714 SUPERFAMILY Riboflavin synthase domain-like 327 424 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0967 Vvi-Chr16 17911251 17915030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0967 18 714 Miscellaneous Gene Families AT1G01580 56.170 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0967 K00521 - vvi:100252447 1417.91