Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0966 ATGATGGGTACTGTGGGCCTAGAACTTACGAATTTTATAAATCCTGAATTGACTTGGAAGACGGTGGCAAAAGGAAACAGGAGTGCATCGAGGCGCTCTAGGAAGCCAGCCTCTAGAAACTCAAAAATGGGTGCTGGCCAGGCTGATAAGAGCCCCAAGAAAACAGAGAATGGCTCAGTTTCCGAATCTGAGAAGCTTGGTGTTGCTGTTCTTGGGAGACGCTTCAGTGATAAAGTAGAGCCTGTACCGATTAAGAAAAGGAGATTTATGTTTCAGTCTCCATCACCACCCCCACGAACCCCTTCTCCTCCCCATGAGGATTCTGAGCAGCTTGTAGATAGTCAGCATTCTTCAAGTCAGCAGTCTAGTTCAAATTCAATTTCCAAGCAACAAATCATGGCAACTCATGCTTCTAAGTTCATTCACAGTGTAGATGTAGTTGTTGATGGAAGGATTTCAGAGGTGACAAATGAAGAGATTGGCGATGGTGAGGACTTTTCAGGCATTGAGATGCTTGCAGCAGCTGCTTGCAATAACAGCATGGGTGATGATGTGACGGAATCAACTACAGAGGATGGTCCAGTTTTGACATGTGAAGGAAACAACTCATCTATTTCTGCAATGCCTATAAAAGAAACTGTTGCATCCCCTGCAACAGCCAATACCTTCCAAAAAGATGTGGCAATAGAAGATGATATAGAGGGCTCATTTTCTCAAGATAATTCAGTGGCTGTCTTGCAGAACCTTCATAGTGACAAGGATGATGGGGCATTGAAAAGGTCTGCTTCTTCACGAGATGATAGGTTACACTGGGACTTGAATGTTGTGATGGATGCATGGGAACAACCTGATGATTATCAAGTTGTTGATTCTCAGACAAACATTTCAGCAGTCTCTGAGGATGGAAAGCAGCAGAGTGAGAAGCTGGATAATTTGGAAGATTGCCAGATACCGAACTCTGGAGATATTAAAACAAACATTGAAACTACAGCGAAATCTATGACTGACACTGTGGTTTTAGGTGATGTAGAAGGCGATATCAACATGGCCTCAGACTCGAGATGTGAGGGTCTTAGGACTTGTGATTCTAACACAGAAGAACATAAGTTGGAAGCATGCTCCACAGCTAACACAACCTGCTCCCATGAAAAAGGTATTCCTACTCCAACTGAACATGCTCTGGAGTCCACAGTAGTTGCTGTTTCTGATGCTAAAGCTTCTGAGGAAGTGATAATGGATGCATGCCTCATGCAACCTGCCAGCCCCAGATCATGTCATATTGGAAATGCACAGATATCTGATGAAAACAGGAATACAGAAATTAGCGGTGTTATTGTGGATCAGAGCAGAGAAGATTGTACTTCTGATGTGCAATTGTATAAACCTGTTTGTTTAGAAAGTGTTGAGGTGGAGAAGAATGAAGTTGGGTTTTCTCCTCCACCAGTCACCAAGACAAACTGTGAAATTGACTGTCTTACGAATAAAGATGATGATAATTCCAGACAAATATCTTCTGGAGAGATGATGAGCACTGACATCTGTTCACTAGGACCTGAACATGCTGAGGTTCCTACTAATGAATCAGGTGAAGTACATGTTACCCATTCTTCACCCAGGTGTGATGATGTGTCTGCGTCTGGTGCATCTGCTATAGAAGGCCAATCTGTGGTAACTGTGGGTGTAAAGGAACACAATGACCAAGTTTCTGCAGATGATGCTACTGAAGTTGATCCTTCAGTGCATGTTGGGGCTAGAGAACTTGTAAACAAGTCTTCTGAGCATTCAACTATCTCAGGAGAACGATCTGAATTCATCCCTGATGAGGATGATCGTGGTCATCCTGGCATGGAGAATGTGACTGAACTCGATGCTGGTTATGACTCTCAGATTGAAGATGGGGAGTTGAGAGAGTCAGTTGTCCATGCTTGGGAGGAAAATGATGCTGAGGATGGGGAAGCTGAACGTGTGGACTATGAATCAGATAACCGAGATATGTATGACTTTGATGCTGTTGACTACCCTGGCCCCATGACGGGGGAAGTTGAAGTGGGATCAGAATGTGAGAAAGAGAGACTTCTTGGGCCAAATCATCATTTTGGTTGTGGCGAAACTACTATCGACAATGGTGTGAAAGGAATCAGTGATCAATCTTGCTTAGGTGGTTCTCTGGCAAATGAAGCAGAATTCAGTAATGGAGGGTTAGTGAAAACTTCAAAACCACAATCATGGACACAGTTTACTAGGAAAGTTGACACAAATATTAAAAGAGGATCGAGTACTGGTACTAATGATGTGGCTGAAGAAGCTGAACAGCCTGCTGGAGGAGGAGGTGCTTTGAAGGAACAAAGCCAGACAAATGTTGCTCAATATGATCAGTTGCCGAACGATCGTGAAATTTCTACTGATAAGAATGTGGAAGTGAATGATGGCAGAGCAATTGGACCAAGGTCAACAAGGAGGGAGTTGCTGTCACGCATTGAAGGACCATCGTACGATATCTTACACAGGAAGGATGCTGTAATTTTGCAGCGTAGCAGATCCAACAACCTCGATGATTCAGATCCTCGAGCTGAAAGGGGAACAGATTCTGACAAATCCATGGGAAGGAGCAGATCTGCTTTGCATATTCACGGAAGAGGCCAGAGAGATGGTAACTGGGATCAACCTTCAACAGGTTATTGGGATTCGAAACGCCGTCATTCACCTAGTTATCATGCCCCCTATGGCTCAGGGCGCCCCAGACCAAGAAGCATTGTTGAGACTGGTGGATTTGTCATGACCTCAGACAGGACAATTTCAAAAGCAGGAGTTGGTGGACTTAATGGCATTCACAGGCAATCGATGAATTCTTCCTCAAAAGGTGTGTATCGCCCCCTAATAAGGAGGAGATCACCATCTGACAGAGATGATGCTTATGGGATGCATATGGGAATGGCACCTGGCAGAGATGTTAGCCCTGAGAGAAGTAGGGGCAGATCTAGAAGATACCAAGGAGTTCATAGAGGCCCTAGGGAGAACTATCATGGGTCCATTCCCGATGAAACTGATGAATTTCCTCTTCGTGTGCCTCATCATTTAGCAAGGAGAGAACGAAGCATTTCTCCCATTTTTAATAGAGGGGCTCCTCATTTTTCTGAAACCCACAAGATATCTCAGTCAAGATCCAGATCCCGTTCCCCTCCTGCTTGGCTGATGTCAAGGGAACGGAATGCTAGCTCAAGACACTTCAGTAGATCTCCAGATTTCAGGTCTGGGGCTCGAATGGAGAGAATGAGGTTGCCCTTTCAGAAGCCCAATTTTGCAGATGATTATGAAGAAGGTTTTCTGTCTCCACCAAGAGGTCGCATCTCCCCACAGCATAATTCCAGATGGATTGATGATCGAAATGGTGCAATGGATCATTTCAGAGATGGGAGATCTCCAGTGAGAATGTTCCAGCAGAGCCAACGTTTTGATTCTATGGGTCCCCCACGAAGATTAAAGTCAAATGATTACTATAGACCCATGATCCATCCTGGAAGATTACCTGAGATGGTTGGTGCTGGTAGGGGACGTAAACATGATGACAGTGATGATGATAGAAGAAAACATGGTGATAGATATGAGATGATTCGTCCAGTGCGGCGTTATGATACAGGTGGTGTTGTGAAGCGCTTCCGGTATGATACAGAAGATTGCGTTTTGTCACGCAACCCTCATAACAATGATGACTGCATTAGGGGTACTGACAGAAGGCCTAGGGATATTCCAAGAAGACCAAGTGAAGAGAAACGTCATTTAAGATATAATCATGAGAGGCTATATAATTCGAGCCCCAATTCATTTGGAATGCGAGAATATGATGAGGATGTATCACCCAGAAGGGGAAGACCTGCATGA 3879 0.4437 MMGTVGLELTNFINPELTWKTVAKGNRSASRRSRKPASRNSKMGAGQADKSPKKTENGSVSESEKLGVAVLGRRFSDKVEPVPIKKRRFMFQSPSPPPRTPSPPHEDSEQLVDSQHSSSQQSSSNSISKQQIMATHASKFIHSVDVVVDGRISEVTNEEIGDGEDFSGIEMLAAAACNNSMGDDVTESTTEDGPVLTCEGNNSSISAMPIKETVASPATANTFQKDVAIEDDIEGSFSQDNSVAVLQNLHSDKDDGALKRSASSRDDRLHWDLNVVMDAWEQPDDYQVVDSQTNISAVSEDGKQQSEKLDNLEDCQIPNSGDIKTNIETTAKSMTDTVVLGDVEGDINMASDSRCEGLRTCDSNTEEHKLEACSTANTTCSHEKGIPTPTEHALESTVVAVSDAKASEEVIMDACLMQPASPRSCHIGNAQISDENRNTEISGVIVDQSREDCTSDVQLYKPVCLESVEVEKNEVGFSPPPVTKTNCEIDCLTNKDDDNSRQISSGEMMSTDICSLGPEHAEVPTNESGEVHVTHSSPRCDDVSASGASAIEGQSVVTVGVKEHNDQVSADDATEVDPSVHVGARELVNKSSEHSTISGERSEFIPDEDDRGHPGMENVTELDAGYDSQIEDGELRESVVHAWEENDAEDGEAERVDYESDNRDMYDFDAVDYPGPMTGEVEVGSECEKERLLGPNHHFGCGETTIDNGVKGISDQSCLGGSLANEAEFSNGGLVKTSKPQSWTQFTRKVDTNIKRGSSTGTNDVAEEAEQPAGGGGALKEQSQTNVAQYDQLPNDREISTDKNVEVNDGRAIGPRSTRRELLSRIEGPSYDILHRKDAVILQRSRSNNLDDSDPRAERGTDSDKSMGRSRSALHIHGRGQRDGNWDQPSTGYWDSKRRHSPSYHAPYGSGRPRPRSIVETGGFVMTSDRTISKAGVGGLNGIHRQSMNSSSKGVYRPLIRRRSPSDRDDAYGMHMGMAPGRDVSPERSRGRSRRYQGVHRGPRENYHGSIPDETDEFPLRVPHHLARRERSISPIFNRGAPHFSETHKISQSRSRSRSPPAWLMSRERNASSRHFSRSPDFRSGARMERMRLPFQKPNFADDYEEGFLSPPRGRISPQHNSRWIDDRNGAMDHFRDGRSPVRMFQQSQRFDSMGPPRRLKSNDYYRPMIHPGRLPEMVGAGRGRKHDDSDDDRRKHGDRYEMIRPVRRYDTGGVVKRFRYDTEDCVLSRNPHNNDDCIRGTDRRPRDIPRRPSEEKRHLRYNHERLYNSSPNSFGMREYDEDVSPRRGRPA* 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 1230 1265 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 1230 1292 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 849 882 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 754 813 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 963 1017 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 845 918 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 113 131 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 778 795 - -
Vvi16g0966 1292 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 6 1288 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 1037 1081 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 1180 1199 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 86 131 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 596 614 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 1152 1199 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 985 1017 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 20 71 - -
Vvi16g0966 1292 MobiDBLite consensus disorder prediction 590 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0966 Vvi-Chr16 17905499 17909663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0966 - - vvi:104882192 2534.6