Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0956 ATGACCACTGGTGGGACTCAGAAGGAGTATGTGGTCGATGTCTGGTCTGGAAACCACCCCTTCTACCTCGGGAACCGCTCCGCTCTTCTAGTGGACGCTGATCAAGTCGAGAAGTTCCGGAAGAAGTTTGGGGAAATATCACAGATTATGGAAATTCCTGTCCTCAAATATGGAGAAATCGTGCTACCACCTAAACGCAAATCTGGTTCTGGTAAAGGGGGAAAGAAGAAGTAG 234 0.4829 MTTGGTQKEYVVDVWSGNHPFYLGNRSALLVDADQVEKFRKKFGEISQIMEIPVLKYGEIVLPPKRKSGSGKGGKKK* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0956 77 Pfam Ribosomal protein L31 2 44 IPR002150 GO:0003735|GO:0005840|GO:0006412
Vvi16g0956 77 SUPERFAMILY L28p-like 2 45 IPR034704 -
Vvi16g0956 77 Gene3D Ribosomal protein L31 1 47 IPR042105 -
Vvi16g0956 77 PANTHER 50S RIBOSOMAL PROTEIN L31, CHLOROPLASTIC 1 76 IPR002150 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0956 Vvi-Chr16 17800541 17800774 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0956 K02909 - vvi:100250681 136.346