Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0952 ATGGATTCACCTGAACGTAGGAGCTATGGGAAACGTGACACAGAGGATAATTCAGATGTGAAAAGTGAAAGAGCCCGGGATGATGAAGAATGGGAGGATAGCGATAAGAGGAAGCACAGATCAAGTAAGTCAAAAAAGCCTAGCAATGGAGAAGAAACTGAAGGATCAGGAGGTGGAAGAAGGAGAACTTCTGGCGAAAGAAATGAAAGCCGAAAAAGGTCAGGTGGCTCTAGAGCTGGAAGTGATGAAGATGATCATGAAATAAAAAAGGACTCCCGTTCTAAGCAGATGAAGAAAAAACAAGAGGAAAGTGCTTTAGAAAAGTTGAGCAGTTGGTACCAAGATGGAGAATTGGAGAACAAGCAAGATGGTGGAGATAAGGCAGGAAGTAGAGGGCATGGTCGAGCTGATGAAGGTGAGAGAAGGAAAATGGCCTCAAAGTTTGCTGACCATGAGGGTTCCCAGAGAAGTAAAAGCAAAGAAGAAAAATCTCGTGATGGAGAGCTTGAAAAAGTAATGGAGAGAGATTCCAGGCATTCAGACAGGAAAGAAACCAACCGAGAGAAAGGCCATGGATCTTCTGATCAGGTGAGAAACCCAAGGAGAAGATGGGATGATGCAGATTCTGTTGTGAAAGGGGAAGAAAGTAATTATGAAAAAGCTGATTTGAGAAGTGGGAAGGCTTCTGATCCCAAGAATGAGGGTGCTAAAGAGAGAAATGCGTCTGCAAGAACTGAACCCACTGAGAGTAAAAACAGAGGCATAGATTCAAATAGCGACAAGGGTGTCAAATCTAGCAACAAGGAAGAGAGAAGAAATGATGCTGAGAGGAGTAAGTGCAAAAACAGGGCAGAAGCTCCTGAAGAAGATAATAAAGCAAGTCCTCTGGCTCGTGAAGATCGATCTGGCAGGGAGAAAAATGAGAAGCACAGACAGCAGCGGACTCCCACTGGTCGCGATGTTGCTGAAAACCGGGAAAGGTCTTTCAATACTGATGAGGATGGAAGTGTATGGATGAGAGACAAAAGTGGGAGAGAAGTTGGGCACTCTAACAGGTCAAGAACACCTGAGAGGAGTGGGAGACGACATCAAGGATCAGAGAACTATGAGACTGACTATGAAAGAAGTGTTGGCCTCAAACGGAAGGAACTGGAAAAGGATGGTTACAGGGATGATAGGTCAAAAGGCAGGGAGGATAGCTGGGGTGACAGGAACAGGGATCGAGAAGGTTCCAAAGAGAGTTGGAAAAGAAGGCAACCCAGCAGTAACGATAAAGAGACAAAAGAAGGGGATGTTGTGTATGATCATGGAAGAGACTGGGAGTTACCAAGACATGCTCGGGATAGGACTGATGGGCGTTCTGGAAACAGGAAAGATGGGAGCAGGGGTGAAGCTGTGAAAACGTCATCAAATTTTGGAATTGCTAGTGAGAATTATGATGTGATAGAGATTCAAACCAAGCCTCTTGATTATGGAAGAGCTGACATGGGATCCAACTTTGGCAGGAGAACTGAAGGTGGTCCTACATCTGACATGAAATCAGCACCAAATGCTGAGGAGTGGGCATATATGCGGGAGGACAGGGCAAGAAGGACTGATGTATATGGGTCTGGCCAGGCTGGTGATGATTTAAAGGAAAGATATATAGATGATAGCACCCCTATGCGGGATCAGCATTCTTGGAGAGAGGACATTGACATTCAGGGAGGGAAAGGAAGAGGTCAGAAAGGTGCTATGTCTGGTCGTGCTGCTGGTGGCCAAAGTTCTAGTAGTGGTTCACAGCCTCCTTATGGAAACCAGGATCCAGGTTCTTTTAGTAGGGCTACTGCTCAAGGAGTAAAAGGGAATAGGGTTGGGAGAGGAGGAAGAGGTAGGCCTACTGGGAGAGACAACCAACAGGTTGGAATCCCATTGCCTTTAATGGGATCACCTTTTGGACCTCTTGGAATGCCGCCACCTGGACCAATGCAGCAACTTAACCCTAGTATGTCTCCTGCTCCAGGGCCTCCAATTTCGCCTGGTGTCTTTATTCCACCATTTTCTCCACCTGTTGTTTGGCCTGGAGCGCGAGCTGTTGATATGAATATGTTAGCTGTTCCACCTGGTCTCTCTTCTGTTCCTCCTGGACCATCAGGTCCGAGGTTTTCTCCTAACATAGGAACTCCACCAAGTCCTGCCATGTACTTTAATCAGCCAGGCCCTGGAAGGGGGCTGCCTCCAAGCATATCTGGCCCTGGTTTTAATGCTTCAGGATCAGTAGGACGTGGACAGTCACATGATAAAGCCCCTGGGGGTTGGGTTCCTCCTAGATCTGGTGGACCTCCTGGTAAAGCTCCTTCAAGAGGAGACCAGAATGATTACTCTCAGAATTTTGTTGACACAGGTATGCGGCCACAGAATTTCATCAGGGAGCTAGAGCTTACTAATGTTGTGGAGGACTACCCCAAACTTCGTGAACTCATACAGAAGAAAGATGAGATTGTTGCTAAATCTGCTTCTCCTCCCATGTACTACAAGTGTGATTTACGGGAGCATGCCCTGTCACCAGAGTTCTTTGGAACTAAGTTCGATGTCATTCTTGTGGACCCCCCTTGGGAGGAATATGTTCATCGGGCTCCTGGTGTTGCTGACCATATGGAGTACTGGACCTTTGAAGAAATTTTAAATCTTAAGATTGAGGCGATTGCAGATACACCCTCTTTCATATTTCTTTGGGTGGGTGATGGTGTGGGCCTTGAGCAGGGCCGTCAATGTCTAAAAAAGTGGGGATTTCGAAGGTGTGAAGATATATGTTGGGTAAAGACAAATAAAACTAATGCAACTCCAGGCTTGCGCCATGATTCTCATACTTTGTTTCAGCACTCAAAGGAACACTGCTTGATGGGCATTAAAGGAACTGTTCGTCGGAGTACCGATGGTCATATCATCCATGCCAACATTGACACGGATGTAATTATAGCTGAGGAACCTCCTTATGGTTCAACTGCAAAGCCTGAAGACATGTACCGGATAATTGAGCATTTCTCTCTTGGCCGTCGGAGGCTTGAGCTCTTTGGTGAAGACCACAATATTCGGTCTGGGTGGCTGACTGTTGGTAACGGATTATCCTCATCAAATTTTAATGCTGAGGCATATGTCAGGAATTTTGGTGATAAGGATGGGAAAGTTTGGCAGGGAGGCGGAGGACGAAATCCTCCTCCAGAGGCGCCCCATCTTGTCATGACAACCCCTGAAATAGAGTCTCTTCGACCCAAGTCGCCAATGAAGAACCAGCAGCAACTGCAGCAGCAGCAGTCGACCTCCATTTCTCTGACAACAGCTAATTCATCAAACAAAAGGCCGGCTGGTAACTCACCCCAGAATCCAAATGCTCTGAGTATGAACCAAGAAGCTTCTAGCTCTAACCCATCAACTCCTGCTCCTTGGGCTTCACCAATGGATGCCTTCAAAGGACGGGAGACCGGCAATATGTCTTCAGAGGATAAGGGTGTTGACATTTATGGGTATAACACATCTTTTGGACAGATAAATGGAGACTATTTAGATTTTGAAGGTCATAGAGGAATGAATTTGTTGTAA 3579 0.4633 MDSPERRSYGKRDTEDNSDVKSERARDDEEWEDSDKRKHRSSKSKKPSNGEETEGSGGGRRRTSGERNESRKRSGGSRAGSDEDDHEIKKDSRSKQMKKKQEESALEKLSSWYQDGELENKQDGGDKAGSRGHGRADEGERRKMASKFADHEGSQRSKSKEEKSRDGELEKVMERDSRHSDRKETNREKGHGSSDQVRNPRRRWDDADSVVKGEESNYEKADLRSGKASDPKNEGAKERNASARTEPTESKNRGIDSNSDKGVKSSNKEERRNDAERSKCKNRAEAPEEDNKASPLAREDRSGREKNEKHRQQRTPTGRDVAENRERSFNTDEDGSVWMRDKSGREVGHSNRSRTPERSGRRHQGSENYETDYERSVGLKRKELEKDGYRDDRSKGREDSWGDRNRDREGSKESWKRRQPSSNDKETKEGDVVYDHGRDWELPRHARDRTDGRSGNRKDGSRGEAVKTSSNFGIASENYDVIEIQTKPLDYGRADMGSNFGRRTEGGPTSDMKSAPNAEEWAYMREDRARRTDVYGSGQAGDDLKERYIDDSTPMRDQHSWREDIDIQGGKGRGQKGAMSGRAAGGQSSSSGSQPPYGNQDPGSFSRATAQGVKGNRVGRGGRGRPTGRDNQQVGIPLPLMGSPFGPLGMPPPGPMQQLNPSMSPAPGPPISPGVFIPPFSPPVVWPGARAVDMNMLAVPPGLSSVPPGPSGPRFSPNIGTPPSPAMYFNQPGPGRGLPPSISGPGFNASGSVGRGQSHDKAPGGWVPPRSGGPPGKAPSRGDQNDYSQNFVDTGMRPQNFIRELELTNVVEDYPKLRELIQKKDEIVAKSASPPMYYKCDLREHALSPEFFGTKFDVILVDPPWEEYVHRAPGVADHMEYWTFEEILNLKIEAIADTPSFIFLWVGDGVGLEQGRQCLKKWGFRRCEDICWVKTNKTNATPGLRHDSHTLFQHSKEHCLMGIKGTVRRSTDGHIIHANIDTDVIIAEEPPYGSTAKPEDMYRIIEHFSLGRRRLELFGEDHNIRSGWLTVGNGLSSSNFNAEAYVRNFGDKDGKVWQGGGGRNPPPEAPHLVMTTPEIESLRPKSPMKNQQQLQQQQSTSISLTTANSSNKRPAGNSPQNPNALSMNQEASSSNPSTPAPWASPMDAFKGRETGNMSSEDKGVDIYGYNTSFGQINGDYLDFEGHRGMNLL* 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0952 1192 MobiDBLite consensus disorder prediction 1 106 - -
Vvi16g0952 1192 MobiDBLite consensus disorder prediction 1082 1157 - -
Vvi16g0952 1192 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 859 865 IPR002052 GO:0003676|GO:0008168|GO:0032259
Vvi16g0952 1192 MobiDBLite consensus disorder prediction 1 470 - -
Vvi16g0952 1192 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 849 992 IPR029063 -
Vvi16g0952 1192 MobiDBLite consensus disorder prediction 119 464 - -
Vvi16g0952 1192 MobiDBLite consensus disorder prediction 1085 1141 - -
Vvi16g0952 1192 ProSiteProfiles mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase-like (MT-A70-like) family profile. 629 1191 - -
Vvi16g0952 1192 ProSiteProfiles MT-A70-like family profile. 815 1054 IPR007757 -
Vvi16g0952 1192 PANTHER N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT 58 240 IPR045123 -
Vvi16g0952 1192 MobiDBLite consensus disorder prediction 543 570 - -
Vvi16g0952 1192 MobiDBLite consensus disorder prediction 705 720 - -
Vvi16g0952 1192 MobiDBLite consensus disorder prediction 582 611 - -
Vvi16g0952 1192 MobiDBLite consensus disorder prediction 491 644 - -
Vvi16g0952 1192 MobiDBLite consensus disorder prediction 705 786 - -
Vvi16g0952 1192 Pfam MT-A70 856 1033 IPR007757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0952 Vvi-Chr16 17755034 17765264 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0952 K23960 - vvi:100254343 2285.76