Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0951 ATGGAATATTCCGGTTGGGCATGGCTTCCAGATGATCTCCTAGAACCCATACTAAACAATTTAGCCTCCATAGTTGACTCTATCAGGTTCGGTGCAGTCTGCACTCCATGGCATAGCCTTGCAGTAAAGAGCTTCCAGCGCCTCCCTGTCAATCAAAGGCCACATCTTCAACCCCCACCACTCCCATGGCTGATGGTTCTCAGCAAACCCAACAGCAAAGACAGCCGCAGTTTCTACAGCATCACCCACCAAAAGCTTTCCAAATTCCACCTCCCGGTCCCTCCCGGTACAAGGTATTGCGGGTCTTCCCATGGCTGGCTGATCACTACAGACGAAACCAATGCAGTAAGCCTCCTCCACCCATTCTCAAGACAAGTCATTCGTCTCCCTCCTCTCACAAGATTGAAGATTCCACAAAGAACTGTTTATGGCTTCGAGTACCACCTCCATAAGGGCGTCCTGTCTGCAAACCCGACTTCAAACCCTGATGATTTTGTGTTGATGGTCATATACGGGCACGACAAGGGGTTAGCCTTCATAAAATCAGGTGATCAGAACTGGGCTTACATAGATTCCATGGTGATGAAAGATGACGTCCTGGACTCTCCATACTTTCTTGACTTGTCATTATTCGGGTTCGAAGATGTTATATACCAAGAAAGAGAGCTCCAGTTCTATGCCTTGTCCTATGACAGTCAGGTTCTGGCCATTAAAACCAGTGGCATAGGGAATATGGTTAAAGTTGTTCCTCCTTATAATTTTGGTTTTGTGCCTGCCTTCAAGCTGTATCTTGTAGAATCCCCCGAGGGAAGAGATTTATGGCAAATTGAGAAGGTATCATTCTATGATAAAAGTAGTGGGTTCAAGGTTTTTGTGATGGTAGATCGGGAAACAAAGCCGGAGTGGGTTGAGGTGAATAGCCTCGGAGATGTTGCCTTGTTCCTGGGAGACAACGACTCCATTGCTGTCACAGCTTCTCGGTTCAGTGGTTGCAGACCCAGCTGTATATATGTTGCTTCTACTGATGACACCTTGGAGATGAACATGGAGGATGAGAGGGAAAGCTTTAGATACCGGTACAAATTGTGTGAGTTCAATGTGGAGACTGGGAGCTATGCAGAAAAGTGGGTACTGGATAATTTGGATCCTTCTCTCGGTCTCATCCCATCCCCTGTTTGGATTGAATGTCTGCCAATATTCAATTGA 1206 0.466 MEYSGWAWLPDDLLEPILNNLASIVDSIRFGAVCTPWHSLAVKSFQRLPVNQRPHLQPPPLPWLMVLSKPNSKDSRSFYSITHQKLSKFHLPVPPGTRYCGSSHGWLITTDETNAVSLLHPFSRQVIRLPPLTRLKIPQRTVYGFEYHLHKGVLSANPTSNPDDFVLMVIYGHDKGLAFIKSGDQNWAYIDSMVMKDDVLDSPYFLDLSLFGFEDVIYQERELQFYALSYDSQVLAIKTSGIGNMVKVVPPYNFGFVPAFKLYLVESPEGRDLWQIEKVSFYDKSSGFKVFVMVDRETKPEWVEVNSLGDVALFLGDNDSIAVTASRFSGCRPSCIYVASTDDTLEMNMEDERESFRYRYKLCEFNVETGSYAEKWVLDNLDPSLGLIPSPVWIECLPIFN* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0951 401 PANTHER OS07G0183000 PROTEIN-RELATED 8 394 - -
Vvi16g0951 401 CDD F-box_SF 7 41 - -
Vvi16g0951 401 Pfam Protein of unknown function (DUF295) 303 349 IPR005174 -
Vvi16g0951 401 SUPERFAMILY F-box domain 3 79 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0951 Vvi-Chr16 17746487 17747692 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0951 - - vvi:104882195 832.787