Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0949 ATGAGAAGTGTGAATAATAGCGTAGAGACTATAAACGCCGCGGCCACTGCGATCGTCTCGGCCGAGAGTCGAGTCCAGCCGACTACGGTTCAGAAGAGAAGATGGGGTAGCTGCTTGAGTTTATACTGGTGCTTTGGATCTCATAGACACAGCAAGCGAATAGGTCATGCTGTTCTTGTTCCTGAACCAATGGTGCCAGGAGCTGTCGCTCCTGCTTCTGAAAACCTGAACCTCTCAACCAGCATTGTACTGCCTTTCATTGCACCTCCCTCTTCTCCTGCATCTTTCCTCCAATCAGATCCTCCGTCCTCCACTCAGTCACCAGCTGGATTTCTATCCCTCACTGCCCTTTCTGTCAATGCCTATTCCCCAAGTGGTCCTGCCTCCATGTTTGCCATTGGCCCTTATGCCCATGAAACTCAACTAGTCTCACCACCTGTATTTTCTACCTTCCCCACAGAGCCATCGACTGCTCCTTTTACTCCCCCTCCAGAATCTGTGCAATTAACTACGCCTTCATCACCTGAAGTTCCATTTGCTCAGCTGCTGACATCTTCACTGGACCGCTCTCGAAGGAACAGTGGAACCAATCAGAAGTTGTCACTGTCCAATTATGAATTCCAGCCTTATCAGCTATACCCAGAAAGCCCAGTTGGCCACCTTATATCACCAATATCAAATTCTGGTACCTCTTCTCCTTTCCCAGATAGACGCCCAATTGTAGAGGCTCCCAAGCTCTTGGGTTTTGAACATTTTTCCACCCGCAGATGGGGTTCAAGGCTGGGTTCTGGATCTTTGACACCAGATGGTGCAGGGCCTGCCTCCCGAGACAGTTTCCTTCTGGAGAACCAGATCTCTGAGGTGGCATCCCTTGCCAACTCTGAGAGTGGATCTCAAAATGGTGAAACTGTAATCGATCATAGGGTCTCATTTGAGTTGGCTGGTGAAGATGTTGCAGTTTGTGTTGAAAAGAAACCAGTGGCATCAGCTGAAACCGTCCAAAACACTCTTCAGGATATAGTTGAAGAAGGCGAAATTGAAAGAGAAAGAGATGGGATTTCAGAGAGTACAGAAAATTGTTGTGAGTTCTGTGTCGGAGAAGCTCTTAAAGCTGCGTCCGAGAAAGCTTCAGCTGAAGGAGAGGAAGAGCAGTGCCATAAAAAGCATCCTCCGATCAGACATGGTTCAATCAAAGAGTTCAATTTTGACAACACAAAGGGAGAAGTCTCAGCCAAGCCGAACATCATCGGTTCTGAGTGGTGGGTAAACGAAAAGGTTGTCGGGAAAGGAACAGGGCCCCAAACCAACTGGACTTTCTTCCCATTGCTGCAGCCCGGAATCAGTTGA 1347 0.484 MRSVNNSVETINAAATAIVSAESRVQPTTVQKRRWGSCLSLYWCFGSHRHSKRIGHAVLVPEPMVPGAVAPASENLNLSTSIVLPFIAPPSSPASFLQSDPPSSTQSPAGFLSLTALSVNAYSPSGPASMFAIGPYAHETQLVSPPVFSTFPTEPSTAPFTPPPESVQLTTPSSPEVPFAQLLTSSLDRSRRNSGTNQKLSLSNYEFQPYQLYPESPVGHLISPISNSGTSSPFPDRRPIVEAPKLLGFEHFSTRRWGSRLGSGSLTPDGAGPASRDSFLLENQISEVASLANSESGSQNGETVIDHRVSFELAGEDVAVCVEKKPVASAETVQNTLQDIVEEGEIERERDGISESTENCCEFCVGEALKAASEKASAEGEEEQCHKKHPPIRHGSIKEFNFDNTKGEVSAKPNIIGSEWWVNEKVVGKGTGPQTNWTFFPLLQPGIS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0949 448 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 447 IPR040420 -
Vvi16g0949 448 MobiDBLite consensus disorder prediction 153 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0949 Vvi-Chr16 17731127 17735644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0949 - - vvi:100264629 877.47