Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0934 ATGGGGATGATGCCTGAGTCTCAGACTTCTATAGAGCTTCCTGTTTTTGACATTGGGCAGTCTCAGCCTTTTGATCCATCATCTCTTTCATCCCTCTTGTTGGCCTGCAAGGAATGGGGTTTCTTCCACATAACTAACCATGGAATCTCCATGGATCTTTTCAAGAAGCTCAAATCTCTCTCAAACTCTCTCTTCTGCCTCCCTTCTGTTTCCAAGCTCAAGGTTGGGCCTTCATCATCCTTGAGGACATACACTCCCCATTTCATTGCCTCCCCTTTCTTTGAGAGTTTTCGTGTTTCTGGACCTGACTTCTTCACCTCTGCACAGAGTTCTGCAGAAGTAGTCTTCAACCACCCGAATTCTGAATTCAGTGAGGTGTTCCAGGAATACTGTACCAAGATGTCTCAGCTCTCAAAAAGAATGATTGAGGTTGTACTGATGTGTCTAGGAAATGATTTTGAGAAGAGACTATATGAATCCGAATTCAACAACTGCAATGGTTATTTGAGAATCAACAACTATTCACCACCAGAGAGCACAAAAGAAGTAGAAGGGCTAGGCATGCACACTGACATGAGCTGCATCACAATTGTATATCAGGATGAGATTGGTGGGCTTCAAGTGAGATCCAAGGAAGGGAAGTGGATGGACATAAACCCATGTGAAGGAACACTGGTGGTGAACATTGGGGACTTGATGCAAGCTTGGAGCAATGCAAATTTAAGATCATCTGAGCACCGAGTTGTGTTAAAACAACAGCATGTAAACCGGCTCTCCCTCGCTTTCTTTTGGTGTTTTGAAGATGACAAGGTAATAATTTCACCCAATGAAGTGGTTGGAGAAGGGAATTCAAGGATCTACCAACCATTTGTTTGTGCAGACTATTTGAAGTTCAGAGAGAGCAATGAGAAAGGGAAGTTTGAGAAAGTTGGGTTCACTGTAAAAGATTTCGCTGGTATTGGGGAATGCATGGAGCTTCTTTAA 984 0.4319 MGMMPESQTSIELPVFDIGQSQPFDPSSLSSLLLACKEWGFFHITNHGISMDLFKKLKSLSNSLFCLPSVSKLKVGPSSSLRTYTPHFIASPFFESFRVSGPDFFTSAQSSAEVVFNHPNSEFSEVFQEYCTKMSQLSKRMIEVVLMCLGNDFEKRLYESEFNNCNGYLRINNYSPPESTKEVEGLGMHTDMSCITIVYQDEIGGLQVRSKEGKWMDINPCEGTLVVNIGDLMQAWSNANLRSSEHRVVLKQQHVNRLSLAFFWCFEDDKVIISPNEVVGEGNSRIYQPFVCADYLKFRESNEKGKFEKVGFTVKDFAGIGECMELL* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0934 327 Pfam 2OG-Fe(II) oxygenase superfamily 170 263 IPR044861 -
Vvi16g0934 327 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 14 297 - -
Vvi16g0934 327 Pfam non-haem dioxygenase in morphine synthesis N-terminal 13 87 IPR026992 -
Vvi16g0934 327 Gene3D - 3 298 IPR027443 -
Vvi16g0934 327 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 267 IPR005123 -
Vvi16g0934 327 FunFam Gibberellin 20-oxidase-like protein 5 298 - -
Vvi16g0934 327 SUPERFAMILY Clavaminate synthase-like 6 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0934 Vvi-Chr16 17593253 17594533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0934 7 295 Glycosyltransferase AT5G59530 26.129 1.90e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0934 - - vvi:100249089 645.966