Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0930 ATGGCCTCAGTGACGACTAATTGGTCTCCGAGCTCGTTCCAGCTCCGTTTCTCCTTCCAATGCAGAAGATCTCCTGCGGTTTTTGTACGGACGCACGTTCGCAAGCTTGATCGTCAGGTTCGCGTGTTGTCCATTGCCGGCGATGGGAATGGAGTGGGGCGACATCGTGATGGGAATTCGTGGATCAGTTCGGAATCCAAGGGTGATGATTTGTCGGGATGGTCCGGTTCAGATGGTTCTGAACAATACGGTAAATCGCAGAAGAAACGATGGCCCGGAGGAATGGTTGGAGCAGGAGTAGCTGGAGTTGTTCTTGTTGCTGGTCTTTCCTTTGCGGCCTTTTCTTTGAGCAAGCAGAATCCTTCCAGACCAGAAAAACAGATGGAGGCCATGACAATACAGATGGAACAAGGAATCCTGCAAGAAGATTATAGTCTAGAGAGTAAGACAGGTACTGATGCCATGCCTACTCCTTCCATTCAAGAAGATATGTCAGGTGAATCACCTTTTGATGACACTCTAGTTGCTGGAGATTCAATGTCAAGCTTGCCTGGTTTTTGTGAATCTGATATTCTTATTGATCCTATTGATACCCTTAGCTTTAATTACTCAGATGCCAGCCTTGCTGTGGGTTCATCAGAATCTTCTCAACTTGAAGAGAATGGGGATGCTCTTAAACTGGTTAACTCGTCAATCCATGATGCTGATACCACAAATCTTAATTCTGATGACCAAGGAGAACTGCTTGGGTCAAAGGGTACAGAAAATTCCAACTTCTCACTAGAGTCATCTTCCAGTTCTTTTCCCAGGACTGTGGATGAAGATCATTATGTGCACTCTGACAAGATGCTAAATGAGTGGAAGAGCATACCAAATAAATCATTTGTGGATGCAAATGGGACTCAACACCCTGTTTCAGAGAAGGAATATCTTGACCTGGACGAGCTGCAGAAGGACATACCAAATGAATCATATGTGAAACTGCATGATCTAAATGCAAGTGGGATTCAAGACCCTGTTTCAGATGGGGAATATCTTGACCCGGACGAGCTGCAGAAGGACATAACAAATAAATCATATGTGAAACTGCGTGATCTAAATGCAAGTGGGATTCAAGATCCTGTTTCAGATAAGGAACATCTTGACCTGGAAGAGCTGCAGGACATACCAAATAAATCATATGAGAAACTGCATGATCTAAATGCAGATAAGGAATATCTTGACATGGAAGAGCTGGAGAAGGACATACCAAATAAATCATATGTGAAACTGTGTGATCTAAATGCAAGTGGGATTCAACACTCTGCTCCAGATGGGGAATATCTTGACCTGGACGAGCTGCAGAAGGACATACCAAATAAATCATATGTGAAACTGCATGATTTAAATGCAGATAGGGAATATCTTGACCTGGAAGAGCTGGAGAAGGACATACCAAATAAATCATATGTGAAACTGCATGATCTAAATGCTAGTGGGTCAACATCTTCTACATCAGCATTACCCTATCCATTTGATTATGACCAGGATGTAAATCTTCAAAATAAGATCCAAAGAAACAGATCATTTTTGGAATCACCAATAGCTGAGAATTCTTTCTCCTCTGCTGGTATACCTGCTCCATCTGCAGTTTCTGAAAGTCTGAAGGTGCTTCCTGGACAGGTTGTTGTTCCTGCAGTTGTTGATCAAGTCCAGGGACAGGCGCTAGCAGCATTGCAGGTTTTAAAGGTCATCGAACCTGATGTTCAACCTAGCGATCTATGTACACGTCGTGAGTTTGCTCGTTGGTTGGTTTCTGCAAGTAGTGTTCTTTCAAGGAATACAGTTTCAAAGGTATATCCAGCTATGTACATAGGAAATATTACTGAACTTGCATTTGATGATATTACACCTGAAGACCCTGATTTTTCATCCATTCAAGGCTTGGCAGAGGCTGGGCTTATCTCAAGCAAGCTATCAAGACGTGATTTGCTTTCTTTTTCAGATGAAGAAGACCAGAGTCCCTTCTATTTCTCTCCTGACAGCCCATTGTCACGGCAAGATCTTGTGAGCTGGAAGATGGCCCTAGAGAAAAGACAGCTCCCAGAAACTGACAAAAAGGTCCTGTACCAAGTTTCTGGTTTTATAGACATCGATAGCATAAACCCTGATGCATGGCCTGCCCTTGTGGCTGATGCATCTGCAGGAGAACAGGGAATAATAGCACTTGCATTTGGTTACACAAGACTGTTCCAACCCAATAAGCCAGTCACAAAGGCTCAAGCTGCTATTGCTCTTGCAACTGGTGAGTCATCAGATATAGTTAGTGAGGAACTTGCACGCATTGAAGCCGAAGCTATGGCAGAAAAGGCTGTTGCTGAGCATAGTGCATTAGTAGATCAAGTTGAGAAAGAACTAAATGCTAGTTTTGAGAAGGAGCTTTCCTTAGAAAGAAAAAAGATTGATGCTATGGAGAAATTGGCTGAAGAAGCACGGCAGGAATTGGAAAAGTTAAGAGCTGAGAGAGATGAAGATAATATTTCCTTAATAAAAGAACGTGCTGCCATTGAATCAGAAATGGAAGTTCTCTCAAGGTTAAGGAGTGAGGTGGAGGAGCAGTTGCAGAGCTTTATGAGTAATAAGGTGGAGATATCTTATGAAAAGGAAAGGATTAGCAAACTTCGGAAAGAAGCAGAAAGTGAAAACCAGGAGATTGCCCGATTACAATATGAGCTGGAGGTTGAGAGGAAAGCCTTGTCTATGGCCAGGGCTTGGGCTGAGGATGAGGCAAAAAGGGCAAGAGAACAAGCAAAAGCCCTGGAGGAGGCTAGAGATCGCTGGGAGAAGCATGGCATCAAAGTTGTTGTTGACAATGAGCTACGTGAAGAGGCCTCTGCTGAAGTTACATGGCTCGATACAGCAAAGCAGTTCTCAGTTGATGGAACTGTCAGCAGGGCTGAGAATTTGGTGGACAAACTCAATGCAATGGGATCTGACCTAAGAGGCAAATCTAAAGATGTTATTGATAACATTGTCCAGAAGATAATCCATTTAATATCAATTTTGAGGGAGTTGGCCTCAAAGGTAGGCACACAAGTCAGAGAGCTAAAAGATGCTGCTGTTGTGAAAGCTGGTGGATCGATACAAGAGTTGCAGCAGAACACAGCAGAATTCAGTTTGGCCATCAAAGAAGGGACAAAACGAGTGGTGGGAGACTGCAGGGGAGGAGTAGAGAAACTTACCCAGAAGTTCAAGACATAA 3240 0.434 MASVTTNWSPSSFQLRFSFQCRRSPAVFVRTHVRKLDRQVRVLSIAGDGNGVGRHRDGNSWISSESKGDDLSGWSGSDGSEQYGKSQKKRWPGGMVGAGVAGVVLVAGLSFAAFSLSKQNPSRPEKQMEAMTIQMEQGILQEDYSLESKTGTDAMPTPSIQEDMSGESPFDDTLVAGDSMSSLPGFCESDILIDPIDTLSFNYSDASLAVGSSESSQLEENGDALKLVNSSIHDADTTNLNSDDQGELLGSKGTENSNFSLESSSSSFPRTVDEDHYVHSDKMLNEWKSIPNKSFVDANGTQHPVSEKEYLDLDELQKDIPNESYVKLHDLNASGIQDPVSDGEYLDPDELQKDITNKSYVKLRDLNASGIQDPVSDKEHLDLEELQDIPNKSYEKLHDLNADKEYLDMEELEKDIPNKSYVKLCDLNASGIQHSAPDGEYLDLDELQKDIPNKSYVKLHDLNADREYLDLEELEKDIPNKSYVKLHDLNASGSTSSTSALPYPFDYDQDVNLQNKIQRNRSFLESPIAENSFSSAGIPAPSAVSESLKVLPGQVVVPAVVDQVQGQALAALQVLKVIEPDVQPSDLCTRREFARWLVSASSVLSRNTVSKVYPAMYIGNITELAFDDITPEDPDFSSIQGLAEAGLISSKLSRRDLLSFSDEEDQSPFYFSPDSPLSRQDLVSWKMALEKRQLPETDKKVLYQVSGFIDIDSINPDAWPALVADASAGEQGIIALAFGYTRLFQPNKPVTKAQAAIALATGESSDIVSEELARIEAEAMAEKAVAEHSALVDQVEKELNASFEKELSLERKKIDAMEKLAEEARQELEKLRAERDEDNISLIKERAAIESEMEVLSRLRSEVEEQLQSFMSNKVEISYEKERISKLRKEAESENQEIARLQYELEVERKALSMARAWAEDEAKRAREQAKALEEARDRWEKHGIKVVVDNELREEASAEVTWLDTAKQFSVDGTVSRAENLVDKLNAMGSDLRGKSKDVIDNIVQKIIHLISILRELASKVGTQVRELKDAAVVKAGGSIQELQQNTAEFSLAIKEGTKRVVGDCRGGVEKLTQKFKT* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0930 1079 MobiDBLite consensus disorder prediction 64 82 - -
Vvi16g0930 1079 ProSiteProfiles S-layer homology (SLH) domain profile. 705 773 IPR001119 -
Vvi16g0930 1079 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 9 1079 - -
Vvi16g0930 1079 Coils Coil 916 943 - -
Vvi16g0930 1079 Coils Coil 877 911 - -
Vvi16g0930 1079 Coils Coil 846 866 - -
Vvi16g0930 1079 MobiDBLite consensus disorder prediction 235 267 - -
Vvi16g0930 1079 MobiDBLite consensus disorder prediction 54 89 - -
Vvi16g0930 1079 Coils Coil 800 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0930 Vvi-Chr16 17567068 17575759 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0930 - - vvi:100264485 2028.06