Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0924 ATGGCCTCAATAGAGACTCCAGATGACCTGTTTACTGATTTAGAATACTCCAGTTATGAATTAGAGGGTCTCGTGTTGATGACAGTTGGGAGAGAACTTGAGTACAAAGGGATTCTTAGATATGTTAGAATGGTAGACCTGTCAAGTAATAATTTTTCTGGATCAATCCCTACTGAATTATCACAACTTGCTGGACTGCGGTTCTTAAACTTGTCTCGAAATCATTTGATGGGAAGGATACCTGAGAAAATTGGAAGAATGACATCTTTACTATCTCTTGATCTCTCCACAAACCATCTTTCAGGTGAAATTCCTCAAAGCTTGGCCGATTTAACATTTCTTAATCTCTTGAACCTATCATACAATCAGTTGTGGGGAAGAATTCCTTTAAGCACACAGCTTCAGAGCTTTGATGCATTCAGCTACATTGGCAATGCCCAACTTTGCGGAGCCCCTCTTACAAAAAACTGCACAGAAGATGAAGAATCTCAAGGTATGGACACCATTGATGAAAATGACGAAGGTTCCGAAATGCGATGGTTCTACATTAGTATGGGACTTGGATTCATTGTAGGCTGTGGGGGAGTCTGTGGTGCTCTTTTGTTCAAGAAAAATTGGAGGTATGCTTATTTCCAGTTTCTTTATGACATTAGAGACTGGGTATATGTGGCCGCAGCGATAAGGTTGAATCGGTTGCACGACAATTTGAGGAGACTATTATTTATTATTTTTATTCTCTTAAAAATAGAAATATGTTTTAAATTATTTTTATTTCTAATGTTAAACCATGACATTAAAATATTTTTGAGAATTTTTATTTTTATTTTTTTATGA 834 0.3645 MASIETPDDLFTDLEYSSYELEGLVLMTVGRELEYKGILRYVRMVDLSSNNFSGSIPTELSQLAGLRFLNLSRNHLMGRIPEKIGRMTSLLSLDLSTNHLSGEIPQSLADLTFLNLLNLSYNQLWGRIPLSTQLQSFDAFSYIGNAQLCGAPLTKNCTEDEESQGMDTIDENDEGSEMRWFYISMGLGFIVGCGGVCGALLFKKNWRYAYFQFLYDIRDWVYVAAAIRLNRLHDNLRRLLFIIFILLKIEICFKLFLFLMLNHDIKIFLRIFIFIFL* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0924 277 Gene3D Ribonuclease Inhibitor 7 166 IPR032675 -
Vvi16g0924 277 PRINTS Leucine-rich repeat signature 90 103 - -
Vvi16g0924 277 PRINTS Leucine-rich repeat signature 111 124 - -
Vvi16g0924 277 PANTHER LRR RECEPTOR-LIKE KINASE 19 216 - -
Vvi16g0924 277 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 36 157 - -
Vvi16g0924 277 SUPERFAMILY L domain-like 39 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0924 Vvi-Chr16 17450061 17455539 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0924 37 219 Miscellaneous Gene Families AT1G74190 36.364 1.67e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0924 - - vvi:100244601 460.299