Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0920 ATGCAAAACCCAATATGGGCGACTAACCCAAGCAAGTCGCCCTTTTGGGGTCCGACATTTCTCGATCGTCATTGCTCGAAACTAATCATTCAGTCTACCAGGAGGCTTAGCAGAAGAAGAAAAAAGGGAGGAGAGAGAGAGTGGGCGCTGAGGGCAATGCCTTGTTCTTCTATCAATACAACGTCTTCTTCTACCGATGACAACGGTGCTCTTCGTGCTTTCAAGCTGAGTGAGTCCACGTTTTTGGCTTCTCTGATGCCTAAGAAGGAGATTGCTGCTGATCGATTCGTCGAGGCGCATCCTGAGTACGATGGCCGTGGGGTTGTTATCGCTATTTTTGATTCCGGTGTAGACCCAGCTGCCGCTGGGTTACAAGTTACCTCAGACGGGAAACCGAAGATCCTTGATGTTCTTGATTGCACTGGCAGTGGAGATATTGATACCTCAACTGTGGTGAAGGCTGATTCAGACGGTTGTCTTCATGGAGCATCAGGGGCAACTCTGGTTGTAAATTCTTCGTGGAAGAACCCTTCTGGGGAGTGGCATGTGGGTTATAAATTGGTATATGAGCTTTTTACAGACACATTGACTTCTCGTTTGAAGAAAGAAAGAAGGAAAAAGTGGGACGAAAAGCACCAGGAAGTAATAGCTGAGGCTGTAAAGAATCTTGATGAATTTGACCAGAAACACATCAAAGTGGAGGATGCACAGTTGAAAAGGGCTCGTGAAGACCTCCAAAACAGAGTTGACTTCCTCCAGAAACAGGCTGAAAGCTATGATGACAAGGGACCTATTATAGATGCTGTTGTCTGGAATGATGGAGAACTATGGAGGGTCGCTCTTGATACACAGAGTCTTGAGGATGACCCAGGGTGTGGGAAACTTGCTGATTTTGTACCCCTAACTAATTATAGGATTGAAAGAAAGTTTGGCGTGTTTAGCAAACTAGATGCCTGCTCATGTGTCGTTAATGTATATGATCAAGGCAATATCTTGAGTATTGTGACAGATAGCTCCCCCCATGGTACTCATGTTGCTGGTATTGCTACTGCTTTTCACCCAAAGGAACCATTGTTGAATGGAGTTGCACCTGGAGCACAAATAATATCTTGTAAAATTGGAGACTCACGCCTAGGTTCAATGGAAACAGGGACAGGCTTGACCAGAGCGTTAATAGCTGCTGTGGAGCACAAGTGTGATCTCATCAACATGAGTTATGGAGAACCTACAATGCTGCCTGATTATGGACGATTTGTTGACCTTGTTAATGAAGCGGTGAATAAGCATCATTTGATATTCGTCAGTAGTGCTGGTAACAGTGGCCCAGCATTGAGCACTGTGGGCTCACCTGGTGGTACCACTTCAAGCATTATAGGTGTTGGTGCATATGTATCTCCTGCAATGGCTGCTGGAGCTCATTGCGTAGTTGAACCCCCATCTGAAGGCCTTGAATACACTTGGTCTAGCCGAGGACCAACAGTTGATGGTGATCTTGGTGTCTGCATAAGTGCTCCAGGTGGAGCTGTAGCGCCTGTGCCTACATGGACTCTTCAAAGACGCATGCTTATGAATGGAACATCAATGTCGTCTCCATCCGCTTGTGGAGGAATTGCATTACTTATTAGTGCAATGAAGGCTGAGGGCATTCCAGTGAGTCCATACAGTGTTCGGAGGGCTCTTGAGAACACATCTGTCCCCGTGGGTGGTTTGCCAGAGGATAAATTGTCCACTGGGCAAGGGCTTATGCAAGTTGACAAGGCACATGGATATATTCAAAAGTCTCGAGATTTTCCAAATGTTTGGTATCAAATAAAGATTAATGAAGCTGGTAAATCAACTTCTACATCACGGGGCATCTACTTAAGGGAAGCTAGTCGCTGCCATCAGTCTACTGAGTGGACAGTGCAAGTTGAGCCAAAGTTCCATGATGATGCAAGTAATTTGGAACAATTAGTTCCTTTTGAGGAGTGTATCGAGCTACATTCCACTGAGAGGGCAATTGTGAGGGCTCCTGAGTATCTCCTTCTTACTCACAATGGGCGTAGCTTCAACGTAATTGTTGATCCTACCAATCTTAGTGATGGCCTACACTATTATGAAATTTATGGAGTAGATTGCAAAGCACCCTGGCGAGGTCCTCTTTTTAGAATTCCTATAACTATAACAAAACCCATGGTTGTAAAAAATCAACCTCCGATAGTTTCGTTTTCAGGGATGACATTTTTGCCAGGACATATAGAACGGAAATATATTGAGGTTCCACTGGGTGCTAGTTGGGTTGAGGCCACCATGCGGACATCAGGATTCGATACTTGTCGAAGGTTTTTTGTCGACACTCTTCAGATTTCTCCATTGCAAAGGCCAATTAAGTGGGAGAGGGTTGCAACATTCTCATCTCCCACTGCAAAAAATTTCACCTTTGCAGTGGAGGGTGGCCGAACAATGGAGTTAGCTATAGCTCAGTTTTGGTCAAGTGGCATAGGAAGTCATGGAGCCACAAATGTAGATTTTGAGATTGTGTTTCATGGGATTAACATCAACAAAGAGGAAGTAGTACTTGATGGAAGTGAAGCACCTATCAGAATTGATGCCAAAGCTCTACTATCATCTGAGAAACTTGCCCCTGCTGCTGTTTTAAACAAGGTACGAATTCCATATCGGCCTATTGAGGCTAAGCTTAGAGCTCTTCCAACAGATCGTGATAAACTACCCTCAGGCAAACAGATTCTAGCATTGACATTAACTTACAAGTTCAAATTGGAAGATGGAGCTGAAATAAAACCTCAAATTCCATTACTTAACAATCGCATATACGATACTAAATTTGAGTCTCAATTTTATATGATTTCAGATGCAAACAAGCGTGTATATGCAATTGGTGATGTCTATCCAAATTCTTCAAAACTTCCCAAGGGTGAATACAATTTGCTGCTACATCTGAGGCATGACAATGTGCTGTTCCTGGAGAAAATGAAGCAATTGCTGTTGTTTATTGAAAGAAATGTGGAAGATAAGGAAGCTGTTCGATTGAGCTTTTTCTCTCAACCAGATGGCCCAATTATGGGAAATGGTGCTTTTAAGACCTCAGTTTTAGTTCCAGGAGTAAAAGAATCCTTTTATGTTGGCCCACCTAACAAAGACAAGCTCCCAAAGAACATTTCTGAAGGATCTGTACTGCTTGGAGCTATCTCATATGGGGTACTATCATTTGGGGGTGAGGAAGGGGGAAAGAATCCAAAAAAGAATCCCGTGTCTTATCAGATATCTTATCTAGTGCCACCAAACAAGGTTGACGAGGAAAAAGGAAAAGGTTCTTCTCCATCTTGCACCAAAAGTGTGTCAGAACGTTTAGAAGAAGAGGTTCGTGATGCAAAGATAAAGATTCTTGGAAGCCTAAAACATGGCACTGATGAAGAGCGCTCAGAGTGGAGAAAGTTAGCTGCCTCTCTCAAGTCTGAATATCCAAAATACACTCCATTGCTCGCTAAGATTTTGGAAGGTTTGGTTTCTGAGAGTAATGCTGAAGACAAAATTTGCCATGATGAAGAGGTTATAGATGCAGCAAATGAAGTAGTTTGTAGCATTGACAGGGATGAATTAGCAAAATATTTTTCACTCAAAAGTGATCCAGAAGATGAGGAGGCAGAGAAAATGAAAAAGAAGATGGAGACGACTCGGGACCAGTTAGCTGAGGCACTGTACCAAAAAGGACTGGCACTGGCAGAGATTGAATCTTTGAAACAGGGTGAGAAGGCTCCAGAAGCAGCTGCAGCTGAAGGCACAAAAGATGTAGACAAGACTGATGATCAATCTGCACCTGAATCTACCCAACCAGATCTGTTTGAGGAGAACTTCAAAGAACTAAAGAAATGGGTGGACATCAAATCCTCTAAATATGGGACCCTCTGGGTGGTGCGTGAGAGACGCTGTGGCAGGCTCGGCACAGCACTGAAGGTACTAGTAGACATGATTCAAGATAACGGAGAGCCTCCAAAGAAGAAGCTGTATGAACTGAAGCTGTCGTTGATTGATGAGATTGGATGGGCCCATTTGGCATCGTACGAGAGACAATGGATGCTTGTGCGATTCCCACCTAGCTTGCCCCTTTTTTAA 4113 0.4381 MQNPIWATNPSKSPFWGPTFLDRHCSKLIIQSTRRLSRRRKKGGEREWALRAMPCSSINTTSSSTDDNGALRAFKLSESTFLASLMPKKEIAADRFVEAHPEYDGRGVVIAIFDSGVDPAAAGLQVTSDGKPKILDVLDCTGSGDIDTSTVVKADSDGCLHGASGATLVVNSSWKNPSGEWHVGYKLVYELFTDTLTSRLKKERRKKWDEKHQEVIAEAVKNLDEFDQKHIKVEDAQLKRAREDLQNRVDFLQKQAESYDDKGPIIDAVVWNDGELWRVALDTQSLEDDPGCGKLADFVPLTNYRIERKFGVFSKLDACSCVVNVYDQGNILSIVTDSSPHGTHVAGIATAFHPKEPLLNGVAPGAQIISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEPTMLPDYGRFVDLVNEAVNKHHLIFVSSAGNSGPALSTVGSPGGTTSSIIGVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTVDGDLGVCISAPGGAVAPVPTWTLQRRMLMNGTSMSSPSACGGIALLISAMKAEGIPVSPYSVRRALENTSVPVGGLPEDKLSTGQGLMQVDKAHGYIQKSRDFPNVWYQIKINEAGKSTSTSRGIYLREASRCHQSTEWTVQVEPKFHDDASNLEQLVPFEECIELHSTERAIVRAPEYLLLTHNGRSFNVIVDPTNLSDGLHYYEIYGVDCKAPWRGPLFRIPITITKPMVVKNQPPIVSFSGMTFLPGHIERKYIEVPLGASWVEATMRTSGFDTCRRFFVDTLQISPLQRPIKWERVATFSSPTAKNFTFAVEGGRTMELAIAQFWSSGIGSHGATNVDFEIVFHGININKEEVVLDGSEAPIRIDAKALLSSEKLAPAAVLNKVRIPYRPIEAKLRALPTDRDKLPSGKQILALTLTYKFKLEDGAEIKPQIPLLNNRIYDTKFESQFYMISDANKRVYAIGDVYPNSSKLPKGEYNLLLHLRHDNVLFLEKMKQLLLFIERNVEDKEAVRLSFFSQPDGPIMGNGAFKTSVLVPGVKESFYVGPPNKDKLPKNISEGSVLLGAISYGVLSFGGEEGGKNPKKNPVSYQISYLVPPNKVDEEKGKGSSPSCTKSVSERLEEEVRDAKIKILGSLKHGTDEERSEWRKLAASLKSEYPKYTPLLAKILEGLVSESNAEDKICHDEEVIDAANEVVCSIDRDELAKYFSLKSDPEDEEAEKMKKKMETTRDQLAEALYQKGLALAEIESLKQGEKAPEAAAAEGTKDVDKTDDQSAPESTQPDLFEENFKELKKWVDIKSSKYGTLWVVRERRCGRLGTALKVLVDMIQDNGEPPKKKLYELKLSLIDEIGWAHLASYERQWMLVRFPPSLPLF* 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0920 1370 Gene3D - 203 261 - -
Vvi16g0920 1370 PANTHER PEPTIDASE S8 83 984 - -
Vvi16g0920 1370 Coils Coil 1212 1235 - -
Vvi16g0920 1370 ProSitePatterns Serine proteases, subtilase family, serine active site. 525 535 IPR023828 -
Vvi16g0920 1370 MobiDBLite consensus disorder prediction 1095 1116 - -
Vvi16g0920 1370 MobiDBLite consensus disorder prediction 1256 1272 - -
Vvi16g0920 1370 SUPERFAMILY Subtilisin-like 98 588 IPR036852 GO:0004252|GO:0006508
Vvi16g0920 1370 ProSiteProfiles Serine proteases, subtilase domain profile. 88 588 - -
Vvi16g0920 1370 FunFam tripeptidyl-peptidase 2 isoform X1 88 173 - -
Vvi16g0920 1370 MobiDBLite consensus disorder prediction 1249 1279 - -
Vvi16g0920 1370 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 85 567 IPR034051 GO:0006508|GO:0008240
Vvi16g0920 1370 FunFam Tripeptidyl-peptidase 2 homolog 265 598 - -
Vvi16g0920 1370 Gene3D - 1111 1370 IPR046939 -
Vvi16g0920 1370 Coils Coil 988 1008 - -
Vvi16g0920 1370 Coils Coil 235 262 - -
Vvi16g0920 1370 FunFam Tripeptidyl-peptidase 2 601 732 - -
Vvi16g0920 1370 FunFam Tripeptidyl-peptidase 2 1111 1370 - -
Vvi16g0920 1370 PRINTS Subtilisin serine protease family (S8) signature 105 124 IPR015500 -
Vvi16g0920 1370 PRINTS Subtilisin serine protease family (S8) signature 337 350 IPR015500 -
Vvi16g0920 1370 PRINTS Subtilisin serine protease family (S8) signature 524 540 IPR015500 -
Vvi16g0920 1370 Gene3D - 601 734 IPR046940 -
Vvi16g0920 1370 Pfam Tripeptidyl peptidase II 868 1053 IPR022229 -
Vvi16g0920 1370 Gene3D Peptidase S8/S53 domain 265 598 IPR036852 GO:0004252|GO:0006508
Vvi16g0920 1370 Gene3D Peptidase S8/S53 domain 88 184 IPR036852 GO:0004252|GO:0006508
Vvi16g0920 1370 ProSitePatterns Serine proteases, subtilase family, histidine active site. 341 351 IPR022398 -
Vvi16g0920 1370 Pfam Subtilase family 105 566 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0920 Vvi-Chr16 17357904 17397226 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0920 K01280 - vvi:100248019 2697.54