Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0918 ATGAATACATATTGCCCAGGCTTTGTACAAGTCAATAGTAAAATCCCATTGAGTATTAATTTTGACCAAGTGTCCACAGTTAATGGAACTCAGTATGATTATCCCATCACTATTTTTCAGGACCAATCAACCCTGGATTGGTGGCTTATAGCCGGTCCAAACATTACTGCTATTGGTTATTGGCCGAAGGAACTTTTCCCCTTCCTGAAGATGGTTGCTATACATGTAGAATGGGGAGGGTATCTGTATAAGGATGATGCAACCTCGACCACAGCTCCACAAATGGGCTCCGGGCTATTCCCTGAGCAAGGATACGGCAAGGCTGCGTACTTCAAACAAATTCAAATTGTTCAAGGGGAAGGCGGATTCGTGGATCCACCTGCAGATTCTGTGAACTTATTTTCAGACAGACCTCAGTGCTATAAGGTTGGACCTAGTGCAGAACTGTTATTTTACACAGGATATCACTTCTACTATGGAGGCCCTGGGGGAGATAATAACAGTAGATTTGTTGATTTCTTTTTCCTACTTGTGCAGACAGAATATGGTGACATTTTCGATTGCGTTGACATCAACAAACAACCAGCATTAGATCATCCTTTGCTCAAGAATCACAGAGTCCAAAAGAAACCAAGTGTCTTTCCCAAAGGATTAGGGCCTAAAACTTCAGCCAAGACTCAAAGTTCAAAAATTGGCCTTCCAGATGGAGGGTGCCCAGAAGGGACAGTGCCCATCAAAAGGATCACGAAAAGAGACCTACTATGGATGAAGTCCCTAAAAAGAAACACTACAAAATTCCATCCAATGGATGCAAACACTCCTGGTTATCATCAAGTATTCACCAGACAGTATCCGAGTAAATATTATGGAGCTCAAGGGGGCTTATCCCTACACAGTGAACCCGCTGCAAATCATCAGTCACACCGAGCCATGATAACTGTTTCAGGTGGTTCACCTGATAAATTGAATGCGATACAAGTTGGATGGATGGTTGATAATTTCGTTAATACAGGTTGCCGGGACCTCTTCTGTCCCGGGTACGTACAAGTTGACTCATCTGTGGCTCCAGGCATGACTTTCTACAATCTTTCTACCGTTGATGGACCTCAATTTGACTACTATTTTGTGATTTTACAGATGAATGCAACAGATGAGAATTGGTGGCTTATGAGTTTGGGGGATGAAACGAGAACAATTGGTTACTGGCCTCAAGCCCTATTTCCGGATATGAAGGAGAGCTTTACCAACCTAGAATGGGGTGGGTATGTATTCAATGACGACCCTAAAACCACGACATCTCCTCAAATGGGTTCAGGGCATTTCCCGGAGGAAGGATACGGCAAAGCAGCTTACTTCAGAGATATCAAACTCATGAGAGACCCACAGGAGGGATTTGCAATTGTATCTACGGAAGAACAAAATGTGAAAGCAATGTGGGAGAGCATGCTAAAAAGTGGAATCAATTCCAAATGCAAGCAGATGATATTCTTGTTGACTATGTTAATAGGCTTCACCCAATTCCTTCCATGA 1530 0.4301 MNTYCPGFVQVNSKIPLSINFDQVSTVNGTQYDYPITIFQDQSTLDWWLIAGPNITAIGYWPKELFPFLKMVAIHVEWGGYLYKDDATSTTAPQMGSGLFPEQGYGKAAYFKQIQIVQGEGGFVDPPADSVNLFSDRPQCYKVGPSAELLFYTGYHFYYGGPGGDNNSRFVDFFFLLVQTEYGDIFDCVDINKQPALDHPLLKNHRVQKKPSVFPKGLGPKTSAKTQSSKIGLPDGGCPEGTVPIKRITKRDLLWMKSLKRNTTKFHPMDANTPGYHQVFTRQYPSKYYGAQGGLSLHSEPAANHQSHRAMITVSGGSPDKLNAIQVGWMVDNFVNTGCRDLFCPGYVQVDSSVAPGMTFYNLSTVDGPQFDYYFVILQMNATDENWWLMSLGDETRTIGYWPQALFPDMKESFTNLEWGGYVFNDDPKTTTSPQMGSGHFPEEGYGKAAYFRDIKLMRDPQEGFAIVSTEEQNVKAMWESMLKSGINSKCKQMIFLLTMLIGFTQFLP* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0918 509 Pfam Neprosin activation peptide 178 269 IPR025521 -
Vvi16g0918 509 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 178 469 - -
Vvi16g0918 509 MobiDBLite consensus disorder prediction 212 236 - -
Vvi16g0918 509 Pfam Neprosin 325 462 IPR004314 -
Vvi16g0918 509 Pfam Neprosin 1 162 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0918 Vvi-Chr16 17298944 17309401 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0918 - - vvi:104882224 614.379