Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0917 ATGAGGGTGGTAGTGGTTTTAGCTCTTCTTTTCTGGGGAATCAGTCATGAGGTGGAGGGAGGAAGGGAACTGGAAAGAGAATTAAGGCGTCTGAACAAGCCAGCCATCAAGAGCTTCCAGACAGAATATGGTGACATTTTCGATTGCGTTGACATCAACAAACAACCAGCATTAGATCATCCTTTGCTCAAGAATCACAAAGTCCAACAAGCATACACCAGACAGTCTCCGGGTACATATTACGGAGCTCAAGGGGGAATATCCCTGCACAAGGAACCTGCTACAGACGATCAGTCACACCGATCCGTGATAACTGTTTCAGGTGGTTCACCTGATAAATTGAATGCCATACAAGTTGGATGGACGGCCGATAACTTTGGTAAAACAGGTTGCAGGGACCTTCTGTGTCCTGGGTTCGTACAAGTTGATAAATCTGTGGCTCCAGGCATGGTTTTCCAGCAACTTTCTACCATTGATGGAGCTCAACATGACTACTACTTCTCCATTTTCCAGAATAACAGCACGGATGAGAATTGGTGGCTTATGGGTTGGCCAGAAAAGAAAATAATAGGTTACTGGCCTAAAACCCTATTTCCAGATATGAAGGAGAGCTTTACCAGCCTAGAATGGGGAGGGTATGTACAAGTGAAGGACCCGAATACAAAGGAATATCCTCAAATGGGTTCAGGAGTTTTCCCGGAGGAAGGATATGGCAAAGCAGCATACTTCAAATTTATTAAACTCGTGAAGAATTCAGCAGGCGAATTTCAAGATGTTTCTCCCAAAGAAGTGGTCACCTTCAATGATCGACCAACTTGCTATAGAGTTGGACCAAAGGCAGAGTTACTATACTGGCCTGGATATCATTTTTTCTATGGAGGGCCTGGAGGAAATTGTGGCCATTGA 906 0.4459 MRVVVVLALLFWGISHEVEGGRELERELRRLNKPAIKSFQTEYGDIFDCVDINKQPALDHPLLKNHKVQQAYTRQSPGTYYGAQGGISLHKEPATDDQSHRSVITVSGGSPDKLNAIQVGWTADNFGKTGCRDLLCPGFVQVDKSVAPGMVFQQLSTIDGAQHDYYFSIFQNNSTDENWWLMGWPEKKIIGYWPKTLFPDMKESFTSLEWGGYVQVKDPNTKEYPQMGSGVFPEEGYGKAAYFKFIKLVKNSAGEFQDVSPKEVVTFNDRPTCYRVGPKAELLYWPGYHFFYGGPGGNCGH* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0917 301 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 24 299 - -
Vvi16g0917 301 Pfam Neprosin activation peptide 38 76 IPR025521 -
Vvi16g0917 301 Pfam Neprosin 117 295 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0917 Vvi-Chr16 17278298 17280237 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0917 - - vvi:104882225 479.944