Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi16g0893 | ATGGCGGTGAATGATGAGTGTAAGCTCAAGTTCTTGGAGCTAAAAGCAAAGAGGAACCACAGGTTCATTGTATTCAAGATTGAGGAGAAGATTCAGCAGGTGGTGGTTGAGAAGCTTGGAAGCCCAGACGAAAGCTATGATGCTTTCACCTCCTCTCTCCCTGCTAATGAATGTCGCTATGCTGTCTTTGATTTTGATTTTACCACTGATGAGAACTGCCAGAAAAGCAAGATTTTCTTCATTGCATGGGCACCGGATACATCGAGGGTGAGAAGTAAGATGCTGTATGCGAGCTCCAAGGATAGATTCAAGAGGGAATTGGATGGAATTCAAGTCGAGTTGCAAGCAACGGATCCAAGTGAAATGAGCCTTGACATTGTAAAATCACGGGCACTGTAA | 399 | 0.4436 | MAVNDECKLKFLELKAKRNHRFIVFKIEEKIQQVVVEKLGSPDESYDAFTSSLPANECRYAVFDFDFTTDENCQKSKIFFIAWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIVKSRAL* | 133 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi16g0893 | 132 | CDD | ADF_cofilin_like | 1 | 131 | IPR017904 | GO:0015629|GO:0030042 | |
| Vvi16g0893 | 132 | ProSiteProfiles | ADF-H domain profile. | 1 | 132 | IPR002108 | GO:0003779 | |
| Vvi16g0893 | 132 | SUPERFAMILY | Actin depolymerizing proteins | 1 | 130 | - | - | |
| Vvi16g0893 | 132 | FunFam | Actin-depolymerizing factor 2 | 1 | 132 | - | - | |
| Vvi16g0893 | 132 | Pfam | Cofilin/tropomyosin-type actin-binding protein | 7 | 129 | IPR002108 | GO:0003779 | |
| Vvi16g0893 | 132 | Gene3D | Severin | 1 | 131 | IPR029006 | - | |
| Vvi16g0893 | 132 | PANTHER | COFILIN-RELATED | 1 | 131 | IPR017904 | GO:0015629|GO:0030042 | |
| Vvi16g0893 | 132 | SMART | adf_2 | 5 | 132 | IPR002108 | GO:0003779 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi16g0893 | Vvi-Chr16 | 17034692 | 17035183 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi16g0893 | K05765 | - | vvi:104882201 | 264.233 |