Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0892 ATGAGAAAATTGAAAGCAATAATTCTGTGTGTTCTCTTGCTTTGGTTGCTGTGCTCAACAATTTTACGTTCATGCAGGGCAAACAACTTGGTTTGTAATGAAAAGGAGAAACAAGCTCTCCTTGACCCTGAAAACCAGCTCTCTTCTTGGTCTATTAAAGACTGTTGTGGATGGCGAGGAGTCCACTGCAGCAATGCCAGTTCTCGAGTTCTCAAACTCAAACTTGCTGATTTGAATTTGGGAGGTGAGATTAGTTCTGCTTTGCTCAAACTAGAGTTTTTGGCTCACTGGGACTTGATCAGCATTCCAAGTTTTTTGGGTTCCATGGGGAGTATAAGATTCCTGGACCTCTCCTCTGCCTGTTTTGGTGGACTAGTTCCTCCTCAGCTTGGAAATATATCCAACCTTCGTCACCTGAATCTGAGAGGTAATGGGCTTTTTATTGAAAACTTGAGTTGGATTTCTCATCTTTCTTCATTGAAATACTTAGACATAGATGGGATTGACCTTCACAGGGGACGCCACTGGCTTGAACCCATAGGTATGCTCCCTTCCCCTTTAGAGCTGCACTTGTCGGATTATCAACTTGATAGCAATATGACTTCATCTCTCGGATATGCCAATTTCTCATCACTCACATTCCTTGATTTGTCTTACAACAGTACCAATCAAGAATTGCCAAATTGGTTGTTTAATCTCAGTAAATATCTTGATCTTTCTATCAATTCCCTTCATGGCAACATTCCTTCATCCATAGGAAACTTATCCTCCTTGAGTGTGTTAAATCTTGATGATAATCCGTTGATTAATGGAACTCTTCCTACGAGTGTGGGGCGTCTTTCAAATTTGATCATGTTTGATTATTGTTCTAAGGTTAGGATAGAAGTTTGA 891 0.4052 MRKLKAIILCVLLLWLLCSTILRSCRANNLVCNEKEKQALLDPENQLSSWSIKDCCGWRGVHCSNASSRVLKLKLADLNLGGEISSALLKLEFLAHWDLISIPSFLGSMGSIRFLDLSSACFGGLVPPQLGNISNLRHLNLRGNGLFIENLSWISHLSSLKYLDIDGIDLHRGRHWLEPIGMLPSPLELHLSDYQLDSNMTSSLGYANFSSLTFLDLSYNSTNQELPNWLFNLSKYLDLSINSLHGNIPSSIGNLSSLSVLNLDDNPLINGTLPTSVGRLSNLIMFDYCSKVRIEV* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0892 296 Gene3D Ribonuclease Inhibitor 33 182 IPR032675 -
Vvi16g0892 296 PANTHER LRR RECEPTOR-LIKE KINASE 32 287 - -
Vvi16g0892 296 Pfam Leucine rich repeat N-terminal domain 37 64 IPR013210 -
Vvi16g0892 296 Gene3D Ribonuclease Inhibitor 183 293 IPR032675 -
Vvi16g0892 296 SUPERFAMILY L domain-like 24 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0892 Vvi-Chr16 17028242 17029223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0892 54 287 Receptor kinase-like Gene Family AT5G27060 35.075 8.18e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0892 - - vvi:100257448 377.481