Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0890 ATGGTTTCATCTCTCAGGCCAGAAATCAATATAAAGCCATGGGAATCATTGTTGAAGGACCTAAAAGAAGGCAACAAGAGGAGCAGGTGGATGGAAAGGGAACCCTATGCTTACTGGAAGGGAAATCCAGCGGTAGCTGCAACCAGGCTAGACCTCCTCAAATGTAATGTTTCAGATAAACAGGACTGGAATGCCCGAGTCTATACCCAGGATTGGATTCGAGAATCACAAGAAGGTTACAAACAATCAGATTTAGCAAGCCAATGCATTCATAGGTATAAAATTTATATTGAAGGCTCTGCATGGTCTGTAAGCCAAAAGTACATTCTTGCCTGCGATTCTGTTACCTTACTAGTAAAGCCTCATTACTACGATTTCTTCACGAGGAGTTTGATGCCGGTGCACCACTATTGGCCCATAAGGGAGGATGACAAGTGCAGATCAATTAAGTTTGCTGTTGACTGGGGCAACCGCCATAAGCAGAAGGCACAGTCCATTGGGAAGGCAGCCAGTGATTTCATCCAAGAGGACTTGAAGATGGACAACGTGTATGACTACATGTTTCATCTTTTAAATGAATATGCTAAGCTGTTGAAGTTCAAGCCCACTGTGCCTGAAAAAGCTGTGGAGCTATGTTCAGAGAGAATGGGTTGTGGTGCAGAAGGATTAAAGAAGAAGTTTATGATGGAATCCATGGTGAAGTATCCCATGGATGCAAGCCCATGCACCATGCCTCCCCCCTTCAGTCCTCTAGAGCTTCAAACTTTTCTCAACAGAAAAGTAAATTCAATAAAACAAGTGGAGGCCTGGGAGAAGAAATTTTGGGAGAATCAAAATACATAG 843 0.433 MVSSLRPEINIKPWESLLKDLKEGNKRSRWMEREPYAYWKGNPAVAATRLDLLKCNVSDKQDWNARVYTQDWIRESQEGYKQSDLASQCIHRYKIYIEGSAWSVSQKYILACDSVTLLVKPHYYDFFTRSLMPVHHYWPIREDDKCRSIKFAVDWGNRHKQKAQSIGKAASDFIQEDLKMDNVYDYMFHLLNEYAKLLKFKPTVPEKAVELCSERMGCGAEGLKKKFMMESMVKYPMDASPCTMPPPFSPLELQTFLNRKVNSIKQVEAWEKKFWENQNT* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0890 280 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 6 276 - -
Vvi16g0890 280 SMART cap10 1 201 IPR006598 -
Vvi16g0890 280 Pfam Glycosyl transferase family 90 7 271 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0890 Vvi-Chr16 17013691 17015121 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0890 - - vvi:100250543 578.941