Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi16g0885 | ATGGCTCAGCAGAAGGTGGTGTTGAAGGTCATGACCATGAGTGATGACAAGACCAAGCAGAAAGCCATGGAAGCTGCAGCTGATATTTATGGAGTTGATTCAATTGCTGCTGATATGAAGGAGCAGAAGCTAACTGTAATTGGAGTGATGGATGCAGTTGCAGTGGTGAAGAAACTGAAGAAAGTAGGCAAAGTCGACATAATATCAGTTGGGCCAGCCAAAGAGGAGAAGAAAGAGGAGAAGAAAGAAGAGAAGAAGGAAGAGAAAAAGGAAGAAAAGAAAGAGGAAAAGAAAGAAGACAAGAAAGAAGAGAAAAAGGATGAGAAAAAATAA | 333 | 0.4084 | MAQQKVVLKVMTMSDDKTKQKAMEAAADIYGVDSIAADMKEQKLTVIGVMDAVAVVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEDKKEEKKDEKK* | 111 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi16g0885 | 110 | PANTHER | COPPER TRANSPORT PROTEIN FAMILY-RELATED | 4 | 99 | - | - | |
| Vvi16g0885 | 110 | MobiDBLite | consensus disorder prediction | 70 | 110 | - | - | |
| Vvi16g0885 | 110 | Coils | Coil | 73 | 110 | - | - | |
| Vvi16g0885 | 110 | SUPERFAMILY | HMA, heavy metal-associated domain | 3 | 64 | IPR036163 | GO:0046872 | |
| Vvi16g0885 | 110 | Gene3D | - | 1 | 76 | - | - | |
| Vvi16g0885 | 110 | ProSiteProfiles | Heavy-metal-associated domain profile. | 4 | 67 | IPR006121 | GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi16g0885 | Vvi-Chr16 | 16977047 | 16977705 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi16g0885 | - | - | vvi:100250657 | 129.413 |