Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0882 ATGCGAACTCGATTCCTCACCACCAACTATTTCACTCCCTCTGCTTCATCATCATCATCGTCATCCAGAGCCCCAGAAACCCTAACTTTCCTCCACCTCCCAGTTCCGCATCCTCCTCCTCCCACTCTCTGCAACTTTGAAGACATCCTCTGCTCATCCTTCCACTCCGTCCTCTCCTTCTCTCTCGCAATCGACAGGTTGCCGATCGACGCTGCTCTTTCTAGACTTTTTTCGGATGTTCTTCCTCAGATTATTGAGGGCGGAGTCGCAGGTTTCACTTATGATGAGCGGAGGAGTTTCATGGCCGGAGGTGCTGAGATTCGGTCTTTGGAGGAGGGAAATAAAATCACCATTGATCATGGGGATGAAAACAAGTTTCAAATAGTACAATTTGACACACCAGAGCTAGATATGTTGTTGGAAAATGCTTGGTTATTTGAAAATGAGGAGATGCAAATTCCCCTTGAAGTTCCAGACATTGAAAATAATCTGGATATGCTCAAACCAGGGCTTAAAATGCAATATCCTCATGTAGTTCTAGAATCAGTTTATTCAGTTTATTCAGTTGAAGATATTACTGTGAATTACCCTATGGATCAAAAGACTTATATGTTGGAAGATGCCAGTTCTATTCAGGAGCAAATTCACTGTTGTCATAGCACATTTCCTCTTTTAGAAGTGGATGAGACAAATTTGGGAATTTCAACAACTCTTTCGGTGGATGATGAACTTCTTTTACATTTTGAAAACATTAAATCCCATTGTTGGACTCAAAAAGAAGACGTGATGGTTGATGGCAAGGAGCTTTTGGGTTCTATGGAAATTATGCTAGAATATTTTTCAGGTCATTGTTCATCAAAGCAGTGCCTCAAATATGAGTTGACTAGCCAAAATTTGTTCCTAGAAATGGATATTTTTATGAGCACTTTGGAGAATTCACATTTTGAAGGGAACTCAGAATTTCTTCCCAGGATATCAGATAACTTTTCTTTCTCATCACTAAGCCCAATTCATTTTCAGGAATTCCAGATCCTTGATACGGATTCATCTCAGTTTTTGGAAGTTTTTTCCATGTTACAAACAGACGATGAACCAGGAGCATGTGGACAGTTGTTCATGGAGCATATGAATGTAAAGAATTTTCATGAATTGATTGTTAGTCATGAGCTAGCTCTTGTTGATGACACATTCAAGGCACTTCCTGTACCTGGTTTCACTGATCATGAAAAGATAATGTCAGTCCATGCCATTGTTGAGGAAATACTAGCAGAGCTAAAGTCACAGCCTTTATTGGCATCTGATGGGATATATTTGGATTGGCATCTTTTGGAGGAAGATAAATGCAACTCTGTTATATATTCCACTTATCGGAAGATGTTTGAGGGGATAGATAGTTACAGTATTGATTCAGATCTGAAAACTGTTGATTGTGGGATGCTTGTATTTGATTTTGTCTTCTCAGGTGACACCTCAAATATGGAAGATATAGAAGAAAGCAAGGAATCACTCAACATGCTCTCTGGTGGAAACTCAATGCTTAATGGGCATCTCATTGGAGGCACTTCAAGTAAGTTGTTGGATATTGGACGTCGAAAAGCCGGGGATGAAGAACTATCTTCTCACACTACTGCAGAGAAAGTTTCATCATTATTCAAATCTTTGTATCAGTTCAGTGATCTTGAGTTTTTCTTAAATCCTCAGAAAGCTCCTGGTAGAGCAAATATTGAACCTGCCATCAAGGACATTGATAACAAGGCTGCAATTCCCATGGTTTCATCCAGTGACCAAATTGCAGTATGTGCTTCCACTGAAGTACAATTTCAGAAGTGGGATATTAGGCTTTACCAGGTTAAGTTGTCTGACAATATTGTGGCCATCATTAGTATCTTGCAAAAGAACTATCTAACCATATTGGAGAATAATACAGAGCTGAAAAAGATGCTTGATTTATTTCTAGATGCAGACAGTTATCAATTGCTCAGGCTTCCAAAAGAGAGGTTGATGGACTGCATTAAGAAACTATGTTCACAGCGAAGCCCTTTGGCTCATGGAGATGAAAGCATAATGACATTGGTCACATTGTATGCAATTAAGCAGATGGCTTGGTACTTGTGTTTCTATGGCATCCACACAACTCATCTATATTTAGACAAGTTATATCAAAACCTGGAGTATTTGAAATGTAGATTAAGCTTGCTTCAGTCATTGATTGAAGATGCACATGAGAAGGCTGACAAAGAACTAACTAGATCACACCCCTCACTATCTGTCATCCAGGGAATTTTGCAGTCGAATGCTGCTACAGGAAATTTGAAAGTATTGATTGTGGCTGAGCAAGTTTTCTGGTTGTCTTTGAAGAAGTTGTTGACTTCCATGAGAATATCATTCAATGAGCTACAAAATTTTCACATGCATAATAAGAATCATCCAGATGCCTGTGAGAGTAATGAATTCACAGATGGTAAAATAGATGATCTGTTGCATTCAGATTGCTTAATAGCAAGCCAAGAGCACATATCTGCATCATTTCCATTTAACAAATTCGGCATCATCTTGGAGTATGGAGGTTCTCATGTCTCATCTAGAATATCCACTATTTCGCCAAAGTTAGCTGGTTTGCCTTGTCTTTACCATTTAAAGATGGATCTGGAGGACTTCAGTATTCCCAAAGCACTTTGTGAGGGGTTTGATATGCCTCAGAATGTTGGAAATACAATGGAAGGTATGATCCAATCCATTGGGGCCCTGCATGGACATATCAATGACCAGAAATCTAAGAATAAAGTAGAAGATCTTGTAGCTGTAAATGAAGTAGATGCTTGTTGTATGCCTCTGCCTGTTTCTCGTGAGCAATCTATTATGGAATTTCTGCATAGTCAGCCAAGCATGCCATCTTTTCCTGGCACAGTCATTGTTGTGAACACTCAAAATTTTGACAAGGAAATGTTGATATCCAGGAGAAGCACTTACCAAAGAATTCTTGCAATGGAGAAAGAAGGAACACAAGTTGTGGAACGTGATTCAAGTCTGCCTGTAGATGTTATAATTAGTGCTGATATTTGCTTAGTGTGGTATGATTGCAGCAACATTGGGAAGAAAACTACTACTCTAGATGAAGCTTCTTCATGCTTGCCTTTGTGTGTTGAGGATATTGCAACAAATGTATTGACATTGCTGAGTTTTACTTTCAGCGGCTGCATTCTGGTTTTTGAGGGAGAAATCAACTTCCTTGCTGCCATAATGGAATCATCAGATGGACTCTATGCTGCTGCGGCCAGTCTGGGAATTGATCTACAGCTCTTCTGTTCCTATTCATCTGAATTGACTGATGAAATCATATTGAGCTCTGTCGGATATGCCACTGAGTTAACTAGATGCCTATATACTAAAATGCCTGAATCAGAAACCCTTGCAGAGTCATTTCTTACTAAATTCCCTTCAATTAATCCTCTCACAGCTCATGCAATACTGTCTTCTGGTGGCATGCTTGTTGAGTTCCTAGAATGGTCACATGAGCGTCGGATCCAAGCAATCCAGAAATATCGTGTTCCTGATGAAAGTGTTACTTTATTAAGTGCTCTATGCAGATATGGAGAGAGGGAGGATTCTAAATCTGGAATTACAGAGTGCTCATCTTCAGTATCTTCCGCTCCTGACTCGGAAAATTTTCACTATAAGATAGAGTCCGAAAGAAAGAAACTGAAGTGCATTGGGAGTCCTTCCAAAAATGATATACACAGGGATGGCTTCTTGAACTTTGAGTCACTAAACCAATTTACAAATTTCACAGATTTTGGTTTAAATACTTCTCAGGTTTCCAAGCAGTATGGAGATTCTTGGATGTCAAATGGTCCAGAGATGTTAGATGGCATAAAACATTCCAGTTCATCTTTGAACAATAAATGGTTTGGCCCAAAACAGGGATTAGAAATGGCTACAATGAAGAATCCTTCCACATTATTCAAGCCGAATGATTCTCAGGTGTTAAAAGGTAGTGAGATGCTATATGAGGTTAAAAAGCCTGGCTTATCCTTGAATGATAAACTGTTGGGTGAAAGACGAGGATCAGATGCAGCTACAAGGGACTGGCATAACAATAATAACCCAGAGGATCTTCACAATGACTTTAAGGGTGAAGTTATTGACCTCAATGATAGTTTCTTAATTGGTGAGGACTTTTCTTCTATTGCTAAGTCTTCAAGGTTTTCACCTTTGGTTCTTGAGCTGGAAGAAGATCCTGCAGCAGGAAAATCAAAAACTTCGAGAAGATTGTCATTTAGCAACAGCAGTCATCCTACATTTCCTACAGCTGCTGAGATAAACTCTAATTCTGATATCTGGACTACTCTTAAAGATCAAAAGCAAAGTTTGGGGAAAGGGATTGTTGAATTTGAAGATACAGAGTTTGGCAAGGGTGACCTGCCTATGAAACACCAAAAACAACTCTTAGAGGGTTCAATGCATAGATCTGCAAAAGATTTCTGTGGGCCATCATTCCAAGAGAAGGACACACATTATAGTGGAACACCACTCTCTAATGCTCTTAATTCAGTTCATCTGCAACAGGGATCACCCTGGACCATAGAATTTCTTAATAGAGTCAGGGAGAAAAGCAAATTGCGTCAGCAGTCCCTTCCTTGTGATAGATCTGGCCCTTGTTTTGAGTACTCTGATAACATATCAAAAGTTTCAAAGAGAAAAAGTCCATCTATTCTTGAATTTTACAAGTACCAAGGGGGCAGCAGCCGCAGCACATCCAAGAAAGTATCAGAACAAAAGGGGCAGAAGAGGCCTTTTCAACCATCTCGCTCATACAAGAAAGGAAATGCTTCAGCCTCCTCATGTCCGACATGGACTCCCATTGATAAGAGAGCCAGACAGACTCTATCTTTTGCAACAAATGGAAGTGGAAGACAAACTAAGCTGGTCTGGGGTGATGGAAATGCTCAGTGTCTGAACAAGAGATTTTGA 4971 0.3971 MRTRFLTTNYFTPSASSSSSSSRAPETLTFLHLPVPHPPPPTLCNFEDILCSSFHSVLSFSLAIDRLPIDAALSRLFSDVLPQIIEGGVAGFTYDERRSFMAGGAEIRSLEEGNKITIDHGDENKFQIVQFDTPELDMLLENAWLFENEEMQIPLEVPDIENNLDMLKPGLKMQYPHVVLESVYSVYSVEDITVNYPMDQKTYMLEDASSIQEQIHCCHSTFPLLEVDETNLGISTTLSVDDELLLHFENIKSHCWTQKEDVMVDGKELLGSMEIMLEYFSGHCSSKQCLKYELTSQNLFLEMDIFMSTLENSHFEGNSEFLPRISDNFSFSSLSPIHFQEFQILDTDSSQFLEVFSMLQTDDEPGACGQLFMEHMNVKNFHELIVSHELALVDDTFKALPVPGFTDHEKIMSVHAIVEEILAELKSQPLLASDGIYLDWHLLEEDKCNSVIYSTYRKMFEGIDSYSIDSDLKTVDCGMLVFDFVFSGDTSNMEDIEESKESLNMLSGGNSMLNGHLIGGTSSKLLDIGRRKAGDEELSSHTTAEKVSSLFKSLYQFSDLEFFLNPQKAPGRANIEPAIKDIDNKAAIPMVSSSDQIAVCASTEVQFQKWDIRLYQVKLSDNIVAIISILQKNYLTILENNTELKKMLDLFLDADSYQLLRLPKERLMDCIKKLCSQRSPLAHGDESIMTLVTLYAIKQMAWYLCFYGIHTTHLYLDKLYQNLEYLKCRLSLLQSLIEDAHEKADKELTRSHPSLSVIQGILQSNAATGNLKVLIVAEQVFWLSLKKLLTSMRISFNELQNFHMHNKNHPDACESNEFTDGKIDDLLHSDCLIASQEHISASFPFNKFGIILEYGGSHVSSRISTISPKLAGLPCLYHLKMDLEDFSIPKALCEGFDMPQNVGNTMEGMIQSIGALHGHINDQKSKNKVEDLVAVNEVDACCMPLPVSREQSIMEFLHSQPSMPSFPGTVIVVNTQNFDKEMLISRRSTYQRILAMEKEGTQVVERDSSLPVDVIISADICLVWYDCSNIGKKTTTLDEASSCLPLCVEDIATNVLTLLSFTFSGCILVFEGEINFLAAIMESSDGLYAAAASLGIDLQLFCSYSSELTDEIILSSVGYATELTRCLYTKMPESETLAESFLTKFPSINPLTAHAILSSGGMLVEFLEWSHERRIQAIQKYRVPDESVTLLSALCRYGEREDSKSGITECSSSVSSAPDSENFHYKIESERKKLKCIGSPSKNDIHRDGFLNFESLNQFTNFTDFGLNTSQVSKQYGDSWMSNGPEMLDGIKHSSSSLNNKWFGPKQGLEMATMKNPSTLFKPNDSQVLKGSEMLYEVKKPGLSLNDKLLGERRGSDAATRDWHNNNNPEDLHNDFKGEVIDLNDSFLIGEDFSSIAKSSRFSPLVLELEEDPAAGKSKTSRRLSFSNSSHPTFPTAAEINSNSDIWTTLKDQKQSLGKGIVEFEDTEFGKGDLPMKHQKQLLEGSMHRSAKDFCGPSFQEKDTHYSGTPLSNALNSVHLQQGSPWTIEFLNRVREKSKLRQQSLPCDRSGPCFEYSDNISKVSKRKSPSILEFYKYQGGSSRSTSKKVSEQKGQKRPFQPSRSYKKGNASASSCPTWTPIDKRARQTLSFATNGSGRQTKLVWGDGNAQCLNKRF* 1657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0882 1656 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 1 1655 IPR038824 GO:0007131
Vvi16g0882 1656 MobiDBLite consensus disorder prediction 1579 1619 - -
Vvi16g0882 1656 MobiDBLite consensus disorder prediction 1 22 - -
Vvi16g0882 1656 MobiDBLite consensus disorder prediction 1595 1619 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0882 - - vvi:104882205 3291.9