Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0879 ATGTCTGCGGAGGAACCTAAGACCGTCGCAGAATCGGAGACGCCGACGGATCCTCCTCCGCCTGAACCAACCGAAGCTCCCAAGGATGTGACCGAGGAGAAAGCCGTAATTCCGCCAGCTCCTCCTCCGGAAGAGAAGCCTGATGAAACCAAAGCACTCGCCATCGTCGAAAAGGTTCCAGAACCCATTGAAGAGAAAGGCTCTGAGGGTGGTTCTGTCAACAGAGACACTGTGCTTGCACGAGTTGCAACAGAGAAGAGGCTATCACTAATCAGAGCATGGGAAGAAAGTGAAAAGTGTAAAGCAGAGAACAAAGCTCAAAAAAAGCTATCTGCCACTGAAGCATGGGAGAACAGCCAAAAAGCATCTGTGGAAGCTGAGCTGAAAAAGATTGAGGAAAATTTGGAGAGGAAGAAGGCAGAATATGTGGAGAAGATGAAAAACAAGATAGCGATAATCCACAAGGAAGCGGAAGAGAAAAGGGCAATGATTGAAGCCAGACGTGGGGAAGATCTTCTCAAGGCAGAGGAGATGGCTGCAAAATACCGTGCTACTGGAAGTGCTCCAAAGAAGTTACTGGGATGCTTCTGA 591 0.4873 MSAEEPKTVAESETPTDPPPPEPTEAPKDVTEEKAVIPPAPPPEEKPDETKALAIVEKVPEPIEEKGSEGGSVNRDTVLARVATEKRLSLIRAWEESEKCKAENKAQKKLSATEAWENSQKASVEAELKKIEENLERKKAEYVEKMKNKIAIIHKEAEEKRAMIEARRGEDLLKAEEMAAKYRATGSAPKKLLGCF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0879 196 Pfam Remorin, C-terminal region 86 191 IPR005516 -
Vvi16g0879 196 PANTHER OS02G0117200 PROTEIN 1 196 - -
Vvi16g0879 196 MobiDBLite consensus disorder prediction 1 52 - -
Vvi16g0879 196 Pfam Remorin, N-terminal region 28 82 IPR005518 -
Vvi16g0879 196 Coils Coil 121 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0879 Vvi-Chr16 16921558 16925806 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0879 - - vvi:100260907 357.836