Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0868 ATGGCTCTGCAACTCTGGGAGACACTGAAGGAGGCAATCACAGCCTATACAGGGCTGTCTCCGACGGCTTTCTTCACAATTCTGGCTTTGGCTTTGGCCGTGTACCATGTTGTATCGGGGTTTTTTGTCTCGCCTGTTCATCCTGTGAGGGAGAGAGAGTTGTTCAAAGAGATGGAGCCTCTGCCCCCTCCTGTTCAGCTTGGTGAGATCACTGAAGAGGAGTTGAAGACCTATGATGGGTCCGATTCCAAGAAACCTTTGCTTATGGCTATCAAGGGTCAGATCTATGATGTTTCACAGGGCAGGATATTCTATGGACCTGGTGGTCCATATGCTCTGTTTGCTGGGAAGGATGCTAGCAGAGCTCTCGCTAAAATGTCTTTTGAAGAACAAGATCTAACAGGAGATCTCTCTGATCTTGGTCCATTCGAACTCGAGGCCTTGCAGGACTGGGAATACAAGTTTATGAGCAAGTATACCAAGGTTGGAACTATTAAGAAGACATTCCCTGTAACCGATGGGTCCTCCACCGTTGAACCCTCTGAAACCACTGATCGTGACATTGCCAAGCCTGCAGAAGATGGTCCGTCAGAGAGCTTGCCCGCCAAACCTGTGGAAGCCACCACTGGCGGGGATGCACAGGAGTGA 648 0.4985 MALQLWETLKEAITAYTGLSPTAFFTILALALAVYHVVSGFFVSPVHPVRERELFKEMEPLPPPVQLGEITEEELKTYDGSDSKKPLLMAIKGQIYDVSQGRIFYGPGGPYALFAGKDASRALAKMSFEEQDLTGDLSDLGPFELEALQDWEYKFMSKYTKVGTIKKTFPVTDGSSTVEPSETTDRDIAKPAEDGPSESLPAKPVEATTGGDAQE* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0868 215 SMART Cyt_b5_2 70 166 IPR001199 -
Vvi16g0868 215 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 61 166 IPR036400 -
Vvi16g0868 215 FunFam Membrane steroid-binding protein 1 68 166 - -
Vvi16g0868 215 Pfam Cytochrome b5-like Heme/Steroid binding domain 71 165 IPR001199 -
Vvi16g0868 215 Gene3D - 68 166 IPR036400 -
Vvi16g0868 215 MobiDBLite consensus disorder prediction 170 215 - -
Vvi16g0868 215 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 21 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0868 Vvi-Chr16 16790841 16793381 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0868 K17278 - vvi:100253241 424.861