Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0851 ATGGCTTCAGTTGAGAAAATCAGAAACGCTCAATGTGCCAAGGGTCCGTCCACCATCCTAGCCATTGGCACAGCTACTCCTGAAAACTGTGTCTACCAGTCTGATTATGCTGATTACTATTTCAGGGTCACTAAGAGCGAGCAATTGACTGAGTTGAAGAAGAAGTTCAATCGCATATGTGAAAAATCAATAATCAAGAAGCACTACATTCATTTGACTGAAAAAATGCTTGAAGAGCACCCAATATTGGTGTCTACATGGCCCCATCTCTTAATATACGGCAGGAGATCATCATTGTTGAGGTACCCAAGCTTGGTAAGGAAGTAG 327 0.422 MASVEKIRNAQCAKGPSTILAIGTATPENCVYQSDYADYYFRVTKSEQLTELKKKFNRICEKSIIKKHYIHLTEKMLEEHPILVSTWPHLLIYGRRSSLLRYPSLVRK* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0851 108 Gene3D - 1 98 IPR016039 GO:0016746
Vvi16g0851 108 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 4 85 IPR011141 GO:0009058|GO:0016747
Vvi16g0851 108 SUPERFAMILY Thiolase-like 1 85 IPR016039 GO:0016746
Vvi16g0851 108 Pfam Chalcone and stilbene synthases, N-terminal domain 5 84 IPR001099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0851 Vvi-Chr16 16521226 16521936 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0851 K00660 - vvi:100263437 152.525