Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0844 ATGGCGTCTGTGGAGGAAATTAGAAATGCTCAGCGTGCCAAGGGTCCGGCCACCGTTCTAGCCATTGGCACAGCTACCCCGGACAACTGTCTGTACCAGTCTGATTTCGCTGATTACTATTTCCGGGTCACTAAAAGCGAGCACATGACCGAGCTCAAGAAGAAGTTCAACCGCATTTGTGACAAATCCATGATCAAGAAGCGTTACATTCATTTGACCGAAGAAATGCTTGAAGAGCACCCAAACATTGGTGCTTATATGGCTCCATCTCTTAACATACGCCAAGAGATTATCACTGCTGAGGTACCCAAGCTTGGTAAGGAAGCAGCATTGAAGGCTCTTAAAGAGTGGGGTCAGCCTAAATCGAAGATCACCCACCTTGTATTTTGTACAACCTCAGGTGTAGAAATGCCTGGTGCAGATTATAAACTCGCTAATCTTTTAGGGCTCGAACCATCTGTCAGAAGAGTGATGTTGTACCATCAAGGGTGCTATGCAGGTGGAACTGTCCTTCGAACCGCTAAGGATCTTGCAGAGAATAATGCAGGAGCACGAGTTCTTAGATCACTGTTGTTACATTTCGTGGTCCTTCCGAAGATGCTTTGGACTCTTTAG 615 0.4634 MASVEEIRNAQRAKGPATVLAIGTATPDNCLYQSDFADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLRSLLLHFVVLPKMLWTL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0844 204 Gene3D - 1 188 IPR016039 GO:0016746
Vvi16g0844 204 SUPERFAMILY Thiolase-like 1 187 IPR016039 GO:0016746
Vvi16g0844 204 FunFam Chalcone synthase 2 1 192 - -
Vvi16g0844 204 Pfam Chalcone and stilbene synthases, N-terminal domain 5 187 IPR001099 -
Vvi16g0844 204 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Vvi16g0844 204 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 4 187 IPR011141 GO:0009058|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0844 Vvi-Chr16 16440652 16441617 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0844 K00660 K13232 vvi:100853675 368.237