Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0843 ATGTCAAGTGCATGTGTGTTGTTTATTTTGGATGAGATGAGAAAGAAATCCCTTAAGGGGGAGAGGGCCACCACGGGTGAAGGATTGGATTGGGGAGTATTATTCGGTTTTGGACCAGGCTTGACTATTGAAACTGTTGTGTTGCATAGCATTCCTATGGTGACAAATTAA 171 0.4269 MSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIPMVTN* 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0843 56 Gene3D - 1 56 IPR016039 GO:0016746
Vvi16g0843 56 SUPERFAMILY Thiolase-like 1 52 IPR016039 GO:0016746
Vvi16g0843 56 Pfam Chalcone and stilbene synthases, C-terminal domain 1 52 IPR012328 -
Vvi16g0843 56 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 1 51 IPR011141 GO:0009058|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0843 Vvi-Chr16 16431088 16431258 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0843 K00660 - vvi:100853406 115.931