Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0821 ATGTCCAGGAACATGGAGCCTCTCAGTGTAGGGAGAGTGGTGGGAGATGTAGTGGATGGTTTCACCCCAAGTGTGAAAATGAGTGTCACTTACAACTCCAATAAGCAAGTTGCTAATGGCCATGAGCTGATGCCCTCTGTTGTTACTGCTAAACCTAGAGTGGAGGTTGGTGGTGAAGACTTAAGGGCTGCTTATACCCTAATCATGACAGACCCGGATGCTCCAAGCCCTAGTGATCCATACCTTAAAGAACATCTTCACTGGATTGTGGCTGACATTCCCGGTACCACTGATGCTTCCTTTGGAAAAGAAATTGTGAGCTACGAGCCCCCAAAGCCGGTAATTGGCATCCACAGATATGCGTTCATCTTGTTTAAGCAGAGAGGAAGAGAAACCGTGATGCCACCAGCTTCAAGAGACCATTTCAACACAAGGAAGTTTGCAGAAGACAACGGTTTAGGATCGCCAGTGGCAGCAGTATACTTCAATGCACAGAGACCAACTGCAGCAAGAAGAAGATGA 522 0.4732 MSRNMEPLSVGRVVGDVVDGFTPSVKMSVTYNSNKQVANGHELMPSVVTAKPRVEVGGEDLRAAYTLIMTDPDAPSPSDPYLKEHLHWIVADIPGTTDASFGKEIVSYEPPKPVIGIHRYAFILFKQRGRETVMPPASRDHFNTRKFAEDNGLGSPVAAVYFNAQRPTAARRR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0821 173 Pfam Phosphatidylethanolamine-binding protein 61 162 IPR008914 -
Vvi16g0821 173 CDD PEBP_euk 25 164 IPR035810 -
Vvi16g0821 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 9 166 IPR035810 -
Vvi16g0821 173 FunFam Terminal flower 1 1 173 - -
Vvi16g0821 173 SUPERFAMILY PEBP-like 4 167 IPR036610 -
Vvi16g0821 173 Gene3D - 2 173 IPR036610 -
Vvi16g0821 173 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0821 Vvi-Chr16 16173226 16174002 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0821 K06910 - vvi:100233010 342.043