Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0816 ATGAGATTGGAAAAGTTGGGAGCTCTTGAGTGGAAAAAAGTTGTCAGTAAGCATCAAGGATGGAGGCTTGTCACTTGCATCTGGTTACATGCTGGTATCATTCATCTGCTTGTAAACATGTTGAGCTTGGTCTTGATTGGTATTCGACTCGAACAGCAATTTGGTTTTGTGCGGATAGGAGTAATTTACCTGTTGTCAGGATTTGGAGGGAGTGTTCTTTCATCTCTATTTATTCAAAATAGCATCTCTGTTGGGGCTTCTGGTGCTCTTTTTGGGCTTTTGGGAGCAATGCTTTCAGAGCTTATTACAAACTGGTCCATGTATACAAACAGGGCTGCAGCACTACTCACACTCTTGGTCATTGTTGCGGTTAATCTAACCGTTGGGATTCTGCCACGTGTCAATAATTTTGCCCATATTGGTGGGTTCGTGACAGGTTTCTTCCTGGGCTTTATTTTGATGCCTCGACCTCAGTTTGGGTGGATAGAGGGTCGGAACCTTCCAGCTGATGTCCGTGTCAAATCCAAATACAAGGCCTACCAATATGTGTGCTGGCTGGTTTCTCTTGTTCTGCTGATTGCAGGATTTACAGTTGGATTAGTGATGCTGTACAAGGGAAAGAATGGGAGTGAACACTGCCATTGGTGTCACTACCTCAGCTGTGTCCCAACCTCTAGCTGGAAATGCGATGAGACTCAATTTTAG 705 0.444 MRLEKLGALEWKKVVSKHQGWRLVTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGFVRIGVIYLLSGFGGSVLSSLFIQNSISVGASGALFGLLGAMLSELITNWSMYTNRAAALLTLLVIVAVNLTVGILPRVNNFAHIGGFVTGFFLGFILMPRPQFGWIEGRNLPADVRVKSKYKAYQYVCWLVSLVLLIAGFTVGLVMLYKGKNGSEHCHWCHYLSCVPTSSWKCDETQF* 235
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0816 234 FunFam RHOMBOID-like protein 1 156 - -
Vvi16g0816 234 SUPERFAMILY Rhomboid-like 14 158 IPR035952 -
Vvi16g0816 234 Pfam Rhomboid family 16 157 IPR022764 GO:0004252|GO:0016020
Vvi16g0816 234 Gene3D - 2 156 IPR035952 -
Vvi16g0816 234 PANTHER RHOMBOID-RELATED 3 229 IPR002610 GO:0004252|GO:0006508|GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi16g0816 Vvi-Chr16 16123315 16125081 Dispersed/Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0816 - - vvi:100241825 446.047