Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi16g0811 | ATGAAGACCTTACAGAGTGCACAGGAAATACAGTCCTCAACCCAAGTTTCACATGAGTCCCAAAGTGACCACCAGAACAACACAGCAGAGGCTCCTGTGGCAGACTCAGGTTCAATATGCATTTCAAGCAATGATAGCAGGAAAGTTTCGCGTGAAGATATTGAACTTGTCCAGAATTTGATAGAACGGTGCCTACAGTTGTACATGAACAGGGATGAAGTGGTGAAGACCCTCTTGAGTCGTGCAAGGATAGATCCTGGATTTACAACTTTGGTATGGCAGAAGTTGGAAGAAGAAAATGCTGATTTTTTCAGGGCCTATTACATAAGATTAAAATTGAAGAAACAAATCATTTTGTTTAATCATTTGCTTGAGCATCAGGCTCATCTCACGAATTATCATGTGTCTCCAAAAGTTCCTTTGGCGCCCATACAGAATGGAATCCATCCCATGCCTGGTAAGTATTGA | 468 | 0.4167 | MKTLQSAQEIQSSTQVSHESQSDHQNNTAEAPVADSGSICISSNDSRKVSREDIELVQNLIERCLQLYMNRDEVVKTLLSRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQIILFNHLLEHQAHLTNYHVSPKVPLAPIQNGIHPMPGKY* | 156 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi16g0811 | 155 | NCBIfam | TIGR01589 domain | 54 | 110 | IPR006476 | - | |
| Vvi16g0811 | 155 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
| Vvi16g0811 | 155 | PANTHER | OS02G0137100 PROTEIN | 51 | 134 | IPR006476 | - | |
| Vvi16g0811 | 155 | Pfam | Plant protein 1589 of unknown function (A_thal_3526) | 57 | 108 | IPR006476 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi16g0811 | Vvi-Chr16 | 16082773 | 16084314 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi16g0811 | - | - | vvi:100264107 | 306.99 |