Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0809 ATGGAGACTCCCAATAAAAAGTGGAAGAAACAGACCCAAATAGCCAAACGCCTTTTCCTAGCCATGCCTTCTGCCAAACCCTCCTCAACCTTTTCCTTCTGTACAAAAACCAACATCTATTCACTTGCTGTCATCACCTTCTTCTGCTCCTTCTCTTACTTCCTCGGCTCCTGGCAACACGGCCGCGGCACCACCTCCACAACGGCAGAATTCAGCCTCCGGGGCCGGTGTAACCCATCACAAAACTCCACCAACACAGCCTTGAACGACCCATTCTTGGCACAATTGTCCATAGACTTCTCCACCCATCATGCGGCTGAGGACGGGGTAGCCACCGTGCCGGAGGAGAAGGTGAAAAGCTACCCTGCATGCGGGGTGGAGTACAGTGAGTACACCCCATGTGAGGGGACGAAAAGGGCTTTGAAGTTTGAGAGAGAGAGGTTGATATACAGAGAGAGACACTGTCCAGAGAAAGGTGATCTGTTGAAGTGCCGTATTCCAGCGCCGTACGGGTACAGGAACCCACCGGCGTGGCCGGCAAGTAGGGACGTGGCGTGGTACGCCAATGTGCCGCACAAAGAGTTGACCGTGGAGAAGGCGGTTCAGAACTGGATTATATATGAAGGAGATCGATTCAGATTTCCTGGCGGCGGCACCATGTTTCCCAATGGTGCTGATGCCTACATTGATGATATCGGAAAGTTGATCAATCTCAAAGATGGCTCCATCCGTACCGCCATTGACACTGGCTGTGGGGTTGCGAGCTGGGGAGCTTATCTTCTTTCTCGGAACATCATCACAATGTCGTTTGCACCGAGGGACACCCATGAAGCACAGGTACAATTTGCTTTGGAGCGAGGAGTTCCTGCTTTGATCGGTGTTCTGGCGTCTATCAGGCTTCCTTATCCGTCTAGGGCCTTTGACATGGCTCATTGCTCTCGCTGCCTCATCCCATGGGGCCAGTATGATGGGGTTTACTTGATTGAAGTTGATCGCGTTCTCCGGCCGGGTGGCTACTGGGTGCTTTCTGGGCCGCCAATCAACTGGAAGAAACATTGGAGAGGGTGGGAGAGAACAGAGAAAGATTTGAAGGCTGAGCAGCAAACCATTGAGAATGTAGCTAAGAGCCTTTGCTGGAAAAAGTTAGTGGAAAAAGATGATATAGCAATTTGGCAGAAACCAATTAATCATTTATACTGCAAGGTTAACAGGAAGATTACTCAGAATCCACCATTCTGCCTGCCACAAGATCCGGATAGGGCCTGGTATACGAAAATGGAAACCTGTTTGACTCCCTTGCCTGAAGTTTCATACAGTCAAGAACTTGCAGGTGGGGAATTGGCGAAATGGCCTGAGAGATTAAATGTGATCCCGCCAAGGATCAGTAGTGGGAGTATAAACGGGGTTACAGCTGAGATTTTCCAACTTAATTCAGAACTATGGAAGAAGAGAATGTCATATTATAAAGCTGTGAACAATCAGCTTCGGCAGCCCGGAAGGTACCGAAACCTTCTAGACATGAATGCCTACCTGGGTGGATTTGCTGCAGCTCTAGTTGAAGATCCAGTTTGGGTGATGAATGTGGTTCCAGTAGACGCAAAAATCAACACATTAGGAGTGATTTATGAAAGGGGACTGATCGGAACATATCAGAACTGGTGTGAAGCCATGTCTACTTACCCGAGGACATATGACCTCATTCATGCTGATTCAGTGTTCAGCCTCTATAAGGACAGATGTGAGATGGAAGATATTCTGTTAGAAATGGATAGAATTTTAAGGCCTGAAGGAAGCGTGATACTTCGAGATGATGTTGATGTTCTGGTGAAGATCAAGAGGATCACTGATGGGCTGAATTGGATGAGTCGAATTGTAGACCATGAAGATGGTCCTCATCAGAGGGAGAAGCTTTTGTTTGCAGTAAAATCATATTGGACAGCACCTGCTGCTGCTGACCAAGAAGGATCCTGA 1971 0.4835 METPNKKWKKQTQIAKRLFLAMPSAKPSSTFSFCTKTNIYSLAVITFFCSFSYFLGSWQHGRGTTSTTAEFSLRGRCNPSQNSTNTALNDPFLAQLSIDFSTHHAAEDGVATVPEEKVKSYPACGVEYSEYTPCEGTKRALKFERERLIYRERHCPEKGDLLKCRIPAPYGYRNPPAWPASRDVAWYANVPHKELTVEKAVQNWIIYEGDRFRFPGGGTMFPNGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLLSRNIITMSFAPRDTHEAQVQFALERGVPALIGVLASIRLPYPSRAFDMAHCSRCLIPWGQYDGVYLIEVDRVLRPGGYWVLSGPPINWKKHWRGWERTEKDLKAEQQTIENVAKSLCWKKLVEKDDIAIWQKPINHLYCKVNRKITQNPPFCLPQDPDRAWYTKMETCLTPLPEVSYSQELAGGELAKWPERLNVIPPRISSGSINGVTAEIFQLNSELWKKRMSYYKAVNNQLRQPGRYRNLLDMNAYLGGFAAALVEDPVWVMNVVPVDAKINTLGVIYERGLIGTYQNWCEAMSTYPRTYDLIHADSVFSLYKDRCEMEDILLEMDRILRPEGSVILRDDVDVLVKIKRITDGLNWMSRIVDHEDGPHQREKLLFAVKSYWTAPAAADQEGS* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0809 656 Gene3D Vaccinia Virus protein VP39 218 386 IPR029063 -
Vvi16g0809 656 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 46 645 IPR004159 GO:0008168
Vvi16g0809 656 FunFam Putative methyltransferase PMT15 199 393 - -
Vvi16g0809 656 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 152 357 IPR029063 -
Vvi16g0809 656 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 487 632 IPR029063 -
Vvi16g0809 656 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 130 642 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0809 Vvi-Chr16 16062537 16065792 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0809 - - vvi:100258938 1370.91