Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0804 ATGGGGGCTGTTTTCTCCGCTGCTTGTGCCCAGCCACCGAGTACCGGCCTCAGTGACGTGCCTGAGAATTGTGTTGCTGAGGTCCTGATGTACCTCGACCCTCCCCAGATTTGCAACTTGGCTCGGCTCAGCAAGACCTTTCATATGGCTTCATCTGCTGATTTTGTCTGGGAGTCCAAGCTGCCCTCAAATTACAAGTTTCTTGTCAAGAAATTGTTGGCTGAGGACCCCGAAAATTTGAGCAAGAAGGAAATTTATGCTAGACTGTGTCAAGCCAACAGCTTTGATGGTGCCAACAAGGAAGTTTGGTTGGAGAAAAGCTATGGTGGAATTTGCTTTGCTGTTTCTTGGAAGGCTTTGAGGATAACAGGGATTGATGATAGGAGGTACTGGAAACATTTGCCAGCTGAGGAATCAAGATTCCACTCAATGGCATATCTTCAACAAATATGGTGGTTTGAGGTGGAAGGAGAGCTGGAGTTTGAATTTCCAGCAGGAACATATAGCATATTTTTCCGAATTCAGCTGGGCAAAACCTCAAGAAGGCTTGGGAGGAAGGTCTGCAACATTGAGCGAGTACATGGCTGGGATATAAAGCCGGTTCGGTTTCAATTATCGACATCGGACGGTCAGCATGCCTTGTCGCAGTGTTATCTGTGTGAACCAGGGAAGTGGGTCCATTACCATGCGGGAGATTTCATGGTGGAGAAGCCTAATACATCCATGAAGGTCAAGTTTTCAATGACCCAGATTGATTGCACCCACACCAAAGGTGGCCTCTGCCTTGACTCAGTGTTCATATGCCCAGCCGAATATAGAGATAGGGTCAAGAATTTATGA 840 0.4702 MGAVFSAACAQPPSTGLSDVPENCVAEVLMYLDPPQICNLARLSKTFHMASSADFVWESKLPSNYKFLVKKLLAEDPENLSKKEIYARLCQANSFDGANKEVWLEKSYGGICFAVSWKALRITGIDDRRYWKHLPAEESRFHSMAYLQQIWWFEVEGELEFEFPAGTYSIFFRIQLGKTSRRLGRKVCNIERVHGWDIKPVRFQLSTSDGQHALSQCYLCEPGKWVHYHAGDFMVEKPNTSMKVKFSMTQIDCTHTKGGLCLDSVFICPAEYRDRVKNL* 280
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0804 279 Pfam Phloem protein 2 111 269 IPR025886 -
Vvi16g0804 279 Gene3D - 10 154 - -
Vvi16g0804 279 SUPERFAMILY F-box domain 10 90 IPR036047 GO:0005515
Vvi16g0804 279 ProSiteProfiles F-box domain profile. 14 60 IPR001810 GO:0005515
Vvi16g0804 279 CDD F-box_AtSKIP3-like 17 62 - -
Vvi16g0804 279 Pfam F-box domain 17 52 IPR001810 GO:0005515
Vvi16g0804 279 PANTHER F-BOX PROTEIN PP2-A15 10 275 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi16g0804 Vvi-Chr16 16006222 16008065 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0804 - - vvi:100248692 588.571