Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0801 ATGCATCACGGTAACCAAATCCCCAGTTTTCGGCGAAACCCCGAATTTTCTCGCTGCCCAAACACCAGGAAGAAAATGAACGGTGTTATTTGGAAGCCGTTAATTCCATTAAAACCTCCGTCATTTCCGGCCAAAGCTCGGTCCTCCCATCTTCCAGTCTCCACGATCAACACCACCCGAAAATTCCAGTCAATCTCTGCGTCAAATCAACAGCAACAACTCAACCTCTCTGTTCTTCGTTTCACTCTCGGGATACCCGGGTTTGATGAGTCCTATTTGCCCAGATGGATCGGGTACGGGTTCGGGTCTTTTATACTGTTGAACCACTTTGTGGGTTCGGACCTCAACACCATTACTGCAGCACAGCTTAGAACGGAGGCTTTGGGGCTTTGTCTGGCAGCATTCTCTGTGGTGCTTCCCTACCTGGGAAAATTTCTTAAGGGCGCTGCTCCTGTGGATCAAACAACTCTTCCGGAAGGCATTGAGCAAATCTTTGTGATGACACAAAATATTTCAGATATCCTGAAAGAGGACTTGGCTTGGGCAACATACATTTTGCTGCGGAACACAAACACCATTGCTGTGCTTATATCAATTCGAGGTGCATTATGCGTGCGTGGCTACTGGAACACACCGGATGATGTATCAAAAGCTCGTGTTCTTGATTGGGTTGAGAAAGAGATTGAGAAGATTGGCCTCTCTGATTTGAAGGACACCCTCTATTTTCCTCAGAGTGCAGATTCTGGACTTTGGGAAATGCTCCCCAAGGGTACCTGTTCTCTCTTGGTGCAGCCAGTTTCGCAAATTCCAAGCCAAGGTACCGACGAGATGGAGAAGATTGATGGATTTGTCCTCCTGGCTTCAAGCATGAATTATGCATATACTGATAAAGATAGAGCCTGGATAGGAGCTGTTGCTAACAAATTTAGAGTTTCAATTTAA 942 0.4628 MHHGNQIPSFRRNPEFSRCPNTRKKMNGVIWKPLIPLKPPSFPAKARSSHLPVSTINTTRKFQSISASNQQQQLNLSVLRFTLGIPGFDESYLPRWIGYGFGSFILLNHFVGSDLNTITAAQLRTEALGLCLAAFSVVLPYLGKFLKGAAPVDQTTLPEGIEQIFVMTQNISDILKEDLAWATYILLRNTNTIAVLISIRGALCVRGYWNTPDDVSKARVLDWVEKEIEKIGLSDLKDTLYFPQSADSGLWEMLPKGTCSLLVQPVSQIPSQGTDEMEKIDGFVLLASSMNYAYTDKDRAWIGAVANKFRVSI* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0801 313 PANTHER PROTEIN COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, CHLOROPLASTIC 57 310 IPR044970 GO:0010190
Vvi16g0801 313 MobiDBLite consensus disorder prediction 1 21 - -
Vvi16g0801 313 Pfam Cofactor assembly of complex C subunit B, CCB2/CCB4 93 309 IPR021325 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0801 - - vvi:100252183 620.157