Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0800 ATGGAAGAGGCTCTAGAAATGCCCATAATCAATGATCTAACCATGGTATTAGGTTCCATATCTCAGTCAAAAGCCACTGGGGTGGTGGTTGATTTCACTGATCCTTCTACAGTTTATGAAAATGTGAAACAGGCAACAGCATTTGGTATGAACAGTGTGGTTTATGTGCCTCGAATCAAACTAGACACAGTAACAGCATTATCTGCATTTTGTGAAAAGGCCAGCATGGGTTGCCTGGTCGCCCCAACTCTGTCCATAGGATCTATACTCCTCCAGCAAGCTGCAATTTCAGCTTCTTTCCACTACAACAATGTTGAGATTGTTGAATCCAGGCCCACTCCAACTGACTTTCCATCACCAGATGCAATCCAAATTGCTAACAACCTCTCAAACCTGGGCCAAATATACAACAGAGAAGACATTTCAACAGATATTTTGGCAAGGGGTCAAGTTCTGGGTGAAGATGGGATCCGGGTCCATAGCTTGGTCCTTCCAGGCCTTCCATCTAGCACAACCGTCTACTTCTCCGGCCCTGGAGAGGTTTACTCTCTCAAACATGACATCACAGATGTGCGGTGTCTCATGCCAGGCCTAATCCTGGCCATTAGAAAGGTCGTGCGGCTGAAGAATTTGGTGTATGGCTTGGAGAAATTTTTGTAG 660 0.4545 MEEALEMPIINDLTMVLGSISQSKATGVVVDFTDPSTVYENVKQATAFGMNSVVYVPRIKLDTVTALSAFCEKASMGCLVAPTLSIGSILLQQAAISASFHYNNVEIVESRPTPTDFPSPDAIQIANNLSNLGQIYNREDISTDILARGQVLGEDGIRVHSLVLPGLPSSTTVYFSGPGEVYSLKHDITDVRCLMPGLILAIRKVVRLKNLVYGLEKFL* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0800 219 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 85 190 - -
Vvi16g0800 219 PANTHER DIHYDRODIPICOLINATE REDUCTASE 1 219 IPR023940 GO:0008839|GO:0009089
Vvi16g0800 219 Gene3D Dihydrodipicolinate Reductase; domain 2 85 189 - -
Vvi16g0800 219 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 109 IPR036291 -
Vvi16g0800 219 FunFam Dihydrodipicolinate reductase, C-terminus family protein, expressed 85 189 - -
Vvi16g0800 219 Pfam Dihydrodipicolinate reductase, C-terminus 90 219 IPR022663 GO:0008839|GO:0009089
Vvi16g0800 219 Gene3D - 23 207 - -
Vvi16g0800 219 PIRSF DHPR 1 219 IPR023940 GO:0008839|GO:0009089
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0800 K16908 - vvi:100241926 427.557