Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0799 ATGATGCGGGTGAAGAATAAACCGGCAGGGCTGTCATCGATCAATGGTGGCTCAGCCGGCGATGGCGGCGAGTCAGGCCCAGTGGAATGGGAGCTGAGACCAGGAGGAATGCTGGTACAGAGACGAGACCCGGATTCTGATCGGAGCTCCGTTCCCGCTCCCACCATTAGAGTTAGGGTTAAATTCGGCTCCATCTATCACGAAATCTATATCAGTTCTCAAGCCACCTTCGGGGAGTTGAAGAAGATGTTGTCAGGGCCAACAGGGCTTCACCACCAAGACCAGAAGCTGTTGTTCAAGGACAAGGAGAGGGACTCCAATGCCTACCTTGACATGGCCGGTGTCAAGGACAGATCGAAAATTCTGTTGGTTGAGGACCCTATTAGCCAGGAGAAGCGATATCTCGAGATGCGAAGAAATGCTAAGATGGAAAAGGCCTCAAAGTCGATCTCCGAAATCAGTTTGGAGGTAGACAGGCTCGCTGGCCAGGTATCAGCTCTTGAATCGGTTATTTCCAAAGGTGGTAAAGTTGCAGAAAAAGTGATGTTGAATCTCACCGAGTTGTTGATGAATCAGTTGATTAATTTGGACAGTATAATCGCGGATGGAGACGTTAAATTGCAGAGGAAAATGCAGGTGAGAAGAGTGCAGAAGTATGTCGAAACTCTAGATATGTTGAAGATAAAGAACTCGACCCCTGACAGCGATGGAGATCAAATGCCAATGCAGCATCAGCAGAAGCGACAGTCTAATGGGCAAAGACCACCACCAGCAGCGCCACCACTAGTTCAACAGCTGCAGCAACCAAGGCATTCAGTAGCCCACCTGCCAATACAAATGCATCAGCAGCAGCAGCAGCCGCCACAGCCATCAAGGCATTCAACATCAGGGCCTGTTGTTGTGACCACAAAATGGGAGACTTTCGATTCTGCCTCAGCCCCACCACTAGTGTCGGCGCCCCCCACATCCGTGACCACTGCAGCCAACATCAATCCAGTTCATCCTAAACTCAATTGGGAATTCTTCGATTGA 1032 0.5 MMRVKNKPAGLSSINGGSAGDGGESGPVEWELRPGGMLVQRRDPDSDRSSVPAPTIRVRVKFGSIYHEIYISSQATFGELKKMLSGPTGLHHQDQKLLFKDKERDSNAYLDMAGVKDRSKILLVEDPISQEKRYLEMRRNAKMEKASKSISEISLEVDRLAGQVSALESVISKGGKVAEKVMLNLTELLMNQLINLDSIIADGDVKLQRKMQVRRVQKYVETLDMLKIKNSTPDSDGDQMPMQHQQKRQSNGQRPPPAAPPLVQQLQQPRHSVAHLPIQMHQQQQQPPQPSRHSTSGPVVVTTKWETFDSASAPPLVSAPPTSVTTAANINPVHPKLNWEFFD* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0799 343 Gene3D BAG domain 126 231 IPR036533 GO:0051087
Vvi16g0799 343 SUPERFAMILY Ubiquitin-like 43 130 IPR029071 -
Vvi16g0799 343 FunFam BAG family molecular chaperone regulator 1 54 125 - -
Vvi16g0799 343 CDD Ubl_AtBAG1_like 55 124 - -
Vvi16g0799 343 ProSiteProfiles BAG domain profile. 149 227 IPR003103 GO:0051087
Vvi16g0799 343 MobiDBLite consensus disorder prediction 229 253 - -
Vvi16g0799 343 MobiDBLite consensus disorder prediction 1 31 - -
Vvi16g0799 343 SMART BAG_1 149 227 IPR003103 GO:0051087
Vvi16g0799 343 PANTHER BCL2-ASSOCIATED ATHANOGENE 21 309 IPR039773 GO:0051087
Vvi16g0799 343 ProSiteProfiles Ubiquitin domain profile. 54 124 IPR000626 GO:0005515
Vvi16g0799 343 MobiDBLite consensus disorder prediction 229 271 - -
Vvi16g0799 343 Pfam BAG domain 150 225 IPR003103 GO:0051087
Vvi16g0799 343 Gene3D - 55 125 - -
Vvi16g0799 343 SUPERFAMILY BAG domain 110 231 IPR036533 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0799 Vvi-Chr16 15947411 15948843 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0799 - - vvi:100260667 626.706