Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0793 ATGGAAACCTTAGCCTCTACCTTCCCTATTTTCACCGCAAATCCAAATTTTCATACCACCAAACCCTCAAAACCCTCTAAGGTTTCTGTTTCAATCAAGCCTCCACCGCCGGACTTCGACTTCAGAGCCCAAATTCTCGAAGACTCTCGAGCCACAATCGCTCAAACCCATCCTCAACTGCTTGACTTGGCCGATAATGGCAGTTTAGTTGTGATCGAAAAGAGGCTCTTCGGCCCCGTGCCTGCCTGGAGGACCGAGTTCGTGGAGCCGGAAGAGATTTGGTTGCTCGGAACCACGCATATTTCGAGCTTCTCGGCTGCGGATGTGGAGCGCGTCGTGGAGGTGGTGAATCCTGATAATGTGGTGGTGGAGCTCTGTAGAAGCAGAGCTGGTATAATGTATACTTCCAATCATGGAGAGCTTAACCAACAATTAAGGTCGAGTATGTTCTCTTTGAGTGGGACTGGATTTTTTGGTGCCATTGGTCGTAGCATAAACTTGGGGGGTCAAACTGCTCTTGCATTACGTCTTCTTTTGGCAGTTTTTTCTTCAAAAATCTCTTCAGATGTCAACCGCCCTTTTGGAGATGAGTTCCGTGCTGCTCGAAAAGCATCTGAAAAAGTTGGTGCTCAAATAGTTTTGGGGGATCGACCAATTGAAATTACTCTTGAGAGGGCTTGGAATTCTTTGGAATGGAATGAGAAACTAAGCCTAGTGATCTCTGTTATTCGTGGAATAACATCATCTGAACTGTCAACAAACGAGATGAAGGAATTGAGTACAGACGACAGCACCTTTCAGCTCTATGATCAGTTAAGTGTGGCATATCCATCACTTCTGCAGCCTCTTATACATGAGCGTGACACGTATCTTGCATGGTCTTTGAAGCGGAGCAAAGCGGTGAATGGCGGTAAGAGAGTTGTGGGGGTCATCGGAAAGGGCCATATGAACGGAGTCATTTACGCTCTAGTATCAGATCAAGGGAACTTGCGGTTTCGGGACCTTGTGGGAAAGAGGTCATCTGGTGATGGTGCTAATGGCTGGGTTGATTCCCTTCTCAAGAACTTGGTTAGGGATACTGTAATTGGTATCCTGTTGTGGGCATTATTTGAACAGATAAAAACCGTGTTATAA 1134 0.463 METLASTFPIFTANPNFHTTKPSKPSKVSVSIKPPPPDFDFRAQILEDSRATIAQTHPQLLDLADNGSLVVIEKRLFGPVPAWRTEFVEPEEIWLLGTTHISSFSAADVERVVEVVNPDNVVVELCRSRAGIMYTSNHGELNQQLRSSMFSLSGTGFFGAIGRSINLGGQTALALRLLLAVFSSKISSDVNRPFGDEFRAARKASEKVGAQIVLGDRPIEITLERAWNSLEWNEKLSLVISVIRGITSSELSTNEMKELSTDDSTFQLYDQLSVAYPSLLQPLIHERDTYLAWSLKRSKAVNGGKRVVGVIGKGHMNGVIYALVSDQGNLRFRDLVGKRSSGDGANGWVDSLLKNLVRDTVIGILLWALFEQIKTVL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0793 377 CDD TraB_PrgY-like 93 323 IPR046345 -
Vvi16g0793 377 PANTHER PHEROMONE SHUTDOWN PROTEIN 54 374 IPR046345 -
Vvi16g0793 377 Pfam TraB/PrgY/gumN family 83 319 IPR002816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0793 Vvi-Chr16 15848819 15855176 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0793 - - vvi:100250288 700.279