Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0788 ATGGCGCAATGTCATTGGATCGCTCTCTCCTTCGCTCTCTCCTTTCTCGTTCGCGTTCTCAACGCTAGTGCCGGCGATTCTGATCCACTCTACAAGGCATGCATAGAACAGTGTGAGAAGACTGGATGTGTCGGGGACAAGTGCTTCCAACACTGTAAACTATCTTCTGATGGGAATCCTATTGGTGGTCCATGGTATCTGCAAGAACCGCTCTATCTGCGGTGGAAGCAGTGGGATTGCCGCAGTGACTGTAGGTACCACTGTATGCTTGCTAGGGAAGAAGAAAGAGAGGAACTTGGTGACAAGCCTGTCAAATATCATGGAAAATGGCCATTCCGGCGTGTATATGGAATTCAGGAACCTGTTTCTGTTGCTCTAGCCACACTCAATCTTGCTATGCAATTTCATGGTTGGGTGTCATTTCTCATCCTTCTTTATTACAAGTTGCCTTTAAGGCCAGATAAGAAGACATTCTATGAATATACTGGCTTATGGCATATCTATGGGATCTTAGCAATGAATGCCTGGTTCTGGAATGCTGTTTTCCACAGTCGAGATGTGGATTTGACAGAGAAACTAGATTATTCTTCTGGGGTGGCATTACTTGGATTTACCCTTATTCTGGCCATACTGCGAGCTTTCAATGTGAGAGATGAGGCTGCCAGGGTCATGATTGCTGCTCCACTGATGGCTTTTGTGACTACCCATATCTTGTATCTGAACTTCTACAAACTTGATTATGGTTTGAACATGAAAGTGTGTTTGACCATGGGCATAGCTCAACTTCTTTTGTGGACGGTGTGGGCTGGTGTCACTCATCATCCATCACGCTGGAAGTTGTGGGTGGTAGTTGTGGGAGGAGCTTTAGCCATGTTCTTGGAAATATATGATTTTCCACCCTACTGGGGATTTGTGGATGCCCATGCTGTTTGGCATGCCCTTGCCATCCCTTTTACCTATCTTTGGTGGAGCTTTGTCAAGGATGACAGCGAGTTCAGAACATCAGCTCTCATGAAGAAAGTGAAGTAG 1029 0.4577 MAQCHWIALSFALSFLVRVLNASAGDSDPLYKACIEQCEKTGCVGDKCFQHCKLSSDGNPIGGPWYLQEPLYLRWKQWDCRSDCRYHCMLAREEEREELGDKPVKYHGKWPFRRVYGIQEPVSVALATLNLAMQFHGWVSFLILLYYKLPLRPDKKTFYEYTGLWHIYGILAMNAWFWNAVFHSRDVDLTEKLDYSSGVALLGFTLILAILRAFNVRDEAARVMIAAPLMAFVTTHILYLNFYKLDYGLNMKVCLTMGIAQLLLWTVWAGVTHHPSRWKLWVVVVGGALAMFLEIYDFPPYWGFVDAHAVWHALAIPFTYLWWSFVKDDSEFRTSALMKKVK* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0788 342 Pfam Per1-like family 70 329 IPR007217 GO:0006506
Vvi16g0788 342 Coils Coil 338 342 - -
Vvi16g0788 342 PANTHER PER1-RELATED 8 337 IPR007217 GO:0006506
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0788 Vvi-Chr16 15754489 15760758 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0788 K23553 - vvi:100267589 731.865