Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0777 ATGGGTTTGAGGTGGTGGAGAAATTTTGGTGCAATTCTTGCTGGAGTATTACTGTTCTTTCATGGCTTCTGTTACTCAGAGAAAGCTCCCAATTATTCATTCCTCCAAGATGCAAAACAGGCTCCACCAAACCTATATTACGACTATATAATCATTGGGGGTGGAACCTCTGGCTGTGCATTGGCTGCAACTCTCTCCCAAAACGCTACCGTTTTGGTGCTTGAAAGAGGAGGCTCGCCCTATGGCAACCCTAAGATAAGAAACCTGGATTCGTTCTTTGCCAACATTTTGGACAATTCTCCATTATCACCTTCCCAATCCTTCATCTCAGAAGATGGAGTCTTCAACACTCGAGCCCGTGTTCTAGGTGGTGGAAGCGCCTTGAATGCTGGTTTCTATTCAAGAGCTAGCGCCGGCGAAGTAAAAAGCTCAGGCTGGGACGAAAGACTGGTGAAGGAGTCTTATGAATGGGTGGAAAAGAAGGTGGTGTTCAAGCCCCCGATGCTGCAGTGGCAGTCTGCTGTCAGAGATGGATTGCTGGAGGCAGGTGTGTTGCCATACAATGGATTTAGCTATGAACATTTGTATGGGACTAAAGTTGGCGGAACCATATTCGATCATCAGGATCACAGACACACTGCTGCTGATTTGCTCGAGTATGCCAACCCTAAAAATATTGTTGTTCTCTTACATGCAACAGTGGAGAAGATTGAGTTTAGATTGCATGGAGAATCAAAGCCAATAGCCTCAGGTGTGATATTTAGAGATGAAGTAGGAGTCAGGCATAATGCGTATAGGAGGGACTCCAAGAGCGAGATCATATTGTCAGCTGGCGCGATTGGAAGCCCACAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGCCCATGTATCCCAGTGATTCTGGAGCAGCCATGGTGGCCAAGGCATGGCTGACAACCCAATGA 1020 0.4216 MGLRWWRNFGAILAGVLLFFHGFCYSEKAPNYSFLQDAKQAPPNLYYDYIIIGGGTSGCALAATLSQNATVLVLERGGSPYGNPKIRNLDSFFANILDNSPLSPSQSFISEDGVFNTRARVLGGGSALNAGFYSRASAGEVKSSGWDERLVKESYEWVEKKVVFKPPMLQWQSAVRDGLLEAGVLPYNGFSYEHLYGTKVGGTIFDHQDHRHTAADLLEYANPKNIVVLLHATVEKIEFRLHGESKPIASGVIFRDEVGVRHNAYRRDSKSEIILSAGAIGSPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPMYPSDSGAAMVAKAWLTTQ* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0777 339 Gene3D - 30 285 IPR036188 -
Vvi16g0777 339 Pfam GMC oxidoreductase 47 284 IPR000172 GO:0016614|GO:0050660
Vvi16g0777 339 SUPERFAMILY FAD/NAD(P)-binding domain 36 284 IPR036188 -
Vvi16g0777 339 PANTHER OSJNBA0019K04.7 PROTEIN 16 284 - -
Vvi16g0777 339 Coils Coil 319 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0777 Vvi-Chr16 15628685 15630144 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0777 1 284 Miscellaneous Gene Families AT3G56060 61.324 1.13e-116 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0777 - - vvi:100241724 577.785