Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0776 ATGAACACCATGATGAAAGCAACAGTGAGAGGTGGAATCATCCTTGAGAAGATCAAAGGTCCGATCTCAACAGGCCACCTGAAGCTCCGAACCACCAACCCAGAAGACAACCCATATGTCACCTTCAATTACTTCGAGGAGCCCGAGGACCTCCAGAGATGTGTGGAAGGCATGCGCACCATCATAAAAGTCATAAACTCAAAAGCCTTCTCCAAGTTCCGATTCCCCCACATACGAGTCCAACTTCTAATAGATATGATGGTATATTCCCCAGTGAACTTGCGGCCCAGACATGTCGGTGCCTCCATCTTCTTAGAACAGTTTTGCATAGACACTGTAATGACGATCTGGCATTATCATGGAGGCTGCCATGTTGGGCGAGTGGTGGAGCCAGACTACAAGGTTATTGGCGTGGATGGGCTAAGAATTATAGATGGTTCCACCTTTAATCACTCTCCGGGGACTAATCCACAAGCTACTGTTATGATGCTTGGAAGGTACATGGGAGAGAAGATTCTTGGTGAAAGATGA 531 0.4708 MNTMMKATVRGGIILEKIKGPISTGHLKLRTTNPEDNPYVTFNYFEEPEDLQRCVEGMRTIIKVINSKAFSKFRFPHIRVQLLIDMMVYSPVNLRPRHVGASIFLEQFCIDTVMTIWHYHGGCHVGRVVEPDYKVIGVDGLRIIDGSTFNHSPGTNPQATVMMLGRYMGEKILGER* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0776 176 SUPERFAMILY FAD-linked reductases, C-terminal domain 9 122 - -
Vvi16g0776 176 Pfam GMC oxidoreductase 21 166 IPR007867 GO:0016614
Vvi16g0776 176 Gene3D - 84 176 IPR036188 -
Vvi16g0776 176 PANTHER OSJNBA0019K04.7 PROTEIN 1 176 - -
Vvi16g0776 176 SUPERFAMILY FAD/NAD(P)-binding domain 80 175 IPR036188 -
Vvi16g0776 176 Gene3D Glucose Oxidase, domain 3 19 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0776 Vvi-Chr16 15627876 15628494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0776 1 176 Miscellaneous Gene Families AT5G51950 68.182 4.97e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0776 - - vvi:100241724 365.54