Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0775 ATGGGTTTGAGGTGGTGGAGAAATTTTGGTGCAGCTCTTGCTGGAGTATTACTGTTCTTTCATGGCTTCTGTTACTCAGAGAAAGCTCCCAATTATTCATTCCTCCAAGAAGCAAAACAGGCTCCACCAAACCTATATTACGACTATATAATCATTGGGGGTGGAACCTCTGGCTGTGCATTGGCTGCAACTCTCTCCCAAAACGCTACCGTTTTGGTGCTTGAAAGAGGAGGCTCGCCCTATGGCAACCCTAAGATAAGAAACCTGGATTCGTTCTTTGCCAACATTTTGGACAATTCTCCATTATCACCTTCCCAATCCTTCATCTCTGAAGATGGAGTCTTCAACACTCGAGCCCGTGTTCTAGGTGGTGGAAGCGCCTTGAATGCTGGTTTTTATTCAAGAGCTAGCGCCGGCTTCGTAAAAAGCTCAGGCTGGGACGAAAGACTGGTGAAGGAATCTTATGAATGGGTGGAAAAGAAGGTGGTGTTCAAGCCCCCGATGCTGCAGTGGCAGTCTGCTGTCAGAGATGGATTGCTGGAGGCAGGTGTGTTGCCATACAATGGATTTAGCTATGAACATTTGTATGGGACTAAAGTTGGCGGAACCATATTCGATCATCAGGATCACAGACACACTGCTGCTGATTTGCTCGAGTATGCCAACCCTAAAAATATTGTTGTTCTCTTACATGCAACAGTGGAGAAGATTGAGTTTAGATTGCATGGAGAATCAAAGCCAATAGCCTCAGGTGTGATATTTAGAGATGAAGTAGGAGTCAGGCATAATGCGTATAGGAGGGACTCCAAGAGCGAGATCATATTGTCAGCTGGCGCGATTGGAAGCCCACAATTGTTGATGCTGAGTGGAATTGGGCCTGAGTCCCATCTTAAGGCCCATGGTATCCCAGTGATTCTGGAGCAGCCCATGGTTGGCCAAGGCATGGCTGACAACCCAATGAATGCCCTGCCCATTCCCTCTCCACGGCCCGTCGAAAATTCCCTCATCCAAGTCGTGGGCATCACCACGTTTGGGAGTTACATCGAAGCCGCTAGCGGTTCCGATATCATCCGTTCTTGGTTTCACAGGCCTCCTGAACAGTTATCCAATGCTTCTACAAACCCAAAAGGTACGGAGAAAGCCCATAAAGCCATGAACACCATGATGAAAGCAACAGTGAGAGGTGGAATCATCCTTGAGAAGATCAAAGGTCCGATCTCAACAGGCCACCTGAAGCTCCGAACCACCAACCCAGAAGACAACCCATATGTCACCTTCAATTACTTCGAGGAGCCCGAGGACCTCCAGAGATGTGTGGAAGGCATGCGCACCATCATAAAAGTCATAAACTCAAAAGCCTTCTCCAAGTTCCGATTCCCCCACATACCAGTCCAACTTCTTATAGATATGATGGTATATTCCCCAGTGAACTTGCGGCCCAGACATGTCGGCGCCTCCATCTTCTTAGAACAGTTTTGCATAGACACTGTAATGACGATCTGGCATTATCATGGAGGCTGCCATGTTGGGCGAGTGGTGGAGCCAGACTACAAGGTTATTGGCGTGGATGGGCTAAGAATTATAGATGGTTCTACCTTTAATCACTCTCCGGGGACTAATCCACAAGCTACTGTTATGATGCTTGGAAGGTACATGGGGGAGAAGATTCTTGGTGAAAGATGA 1683 0.4765 MGLRWWRNFGAALAGVLLFFHGFCYSEKAPNYSFLQEAKQAPPNLYYDYIIIGGGTSGCALAATLSQNATVLVLERGGSPYGNPKIRNLDSFFANILDNSPLSPSQSFISEDGVFNTRARVLGGGSALNAGFYSRASAGFVKSSGWDERLVKESYEWVEKKVVFKPPMLQWQSAVRDGLLEAGVLPYNGFSYEHLYGTKVGGTIFDHQDHRHTAADLLEYANPKNIVVLLHATVEKIEFRLHGESKPIASGVIFRDEVGVRHNAYRRDSKSEIILSAGAIGSPQLLMLSGIGPESHLKAHGIPVILEQPMVGQGMADNPMNALPIPSPRPVENSLIQVVGITTFGSYIEAASGSDIIRSWFHRPPEQLSNASTNPKGTEKAHKAMNTMMKATVRGGIILEKIKGPISTGHLKLRTTNPEDNPYVTFNYFEEPEDLQRCVEGMRTIIKVINSKAFSKFRFPHIPVQLLIDMMVYSPVNLRPRHVGASIFLEQFCIDTVMTIWHYHGGCHVGRVVEPDYKVIGVDGLRIIDGSTFNHSPGTNPQATVMMLGRYMGEKILGER* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0775 560 Pfam GMC oxidoreductase 405 550 IPR007867 GO:0016614
Vvi16g0775 560 SUPERFAMILY FAD/NAD(P)-binding domain 41 559 IPR036188 -
Vvi16g0775 560 SUPERFAMILY FAD-linked reductases, C-terminal domain 315 506 - -
Vvi16g0775 560 Gene3D - 47 549 IPR036188 -
Vvi16g0775 560 PANTHER OSJNBA0019K04.7 PROTEIN 17 560 - -
Vvi16g0775 560 Gene3D - 164 499 - -
Vvi16g0775 560 ProSitePatterns GMC oxidoreductases signature 2. 278 292 IPR000172 GO:0016614|GO:0050660
Vvi16g0775 560 Pfam GMC oxidoreductase 47 319 IPR000172 GO:0016614|GO:0050660
Vvi16g0775 560 PIRSF Alcohol_oxidase 26 560 IPR012132 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0775 Vvi-Chr16 15621736 15623941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0775 16 560 Miscellaneous Gene Families AT5G51950 62.143 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0775 - - vvi:100264005 1141.72