Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0772 ATGCACTCGCTTTGCAGTGGAGATGCCACACAGGTATGCCTTCATGGCTGCTGTCCGAGACCTGTCCCCTTGCCTGAACCCCAGAAGAAAGTCCCCAGCTCCAGAAGCACTGCTGCGGATTGTCGCCGCGACTTTGCTGCAACTACTGCTGCTTGTTTCTTCCCCAATACACAATTCACCAATCATGAGTCTCTCCCTTCCTTGCAAGAATCCTTCACTCTGTTTGAGGAAGCTTACCCTCAGTACTCCGAGACTGATCAAGCTGACCGAATCCGAGCCCAGGAGTACCATCATCTTCTTCTCTCCAACCACATCTGCCTTGACTATATTGGCATCGGTCTCTTTTCCCATTGCCAGATACAAATTAAGACCTCTTCACCAACTACAATTGCCTCTACTTCTTCTCCATCAAATTTACCATCTCCCCAGAGTTCGAATATCCCCTTATTCGGTATATCATATAAGTCAGTGAATCTGAAGTCGCTGCTACAATATGGTGGTCAGGAATCAGCACTGGAATCTGCAATGAAGAGAAAAATCATGGGTTTTCTTAATATCTCCGAAAATGATTACTGCATGGTTTTCACTGCTAACAGAACCTCAGCTTTTAAACTTCTAGCAGAATCCTATCCGTTCCAATCTAGCCAGAAGCTTTTGACGGTTTACGACTATGAGAGTGAGGCGGTGGAAGCAATGGTTGAAACGTCAGAGAAAAGAGGAGCCCGCGTCATGTCAGCAGAGTTCTCATGGCCGAGACTTAGAGTTAACTCTGGAAAATTGAGGAAGATGGTTGTGAGAAATAAGAAGAAAAAAAATAGAGGACTTTTCGTGTTCCCCCTTCAGTCTAGAATGACTGGAGCAAGATACCATTATCTATGGATGAACATAGCACAGGAGAATGGGTGGCATGTATTGCTTGATGCTTGTGCATTGGGACCAAAGGACATGGACACCTTCGGCCTCTCTCTCTTTCGTCCAGACTTCCTCATTTGTTCTTTCTACAAGGTTTTTGGGGAAAACCCAACTGGATTTGGGTGCCTATTTGTCAAGAAATCCACTGTTCCAATCCTGGAAGCTTCTACGAGCACCGGGATTGTGAATCTTGTTCCAGCAAAGAAGCTGTTTTGGTTACCTGCCGATTCTTCTGGTACTGACACCGAACCTGAACAGACATCTAAATTCGAGTTTCAAGAAGAATTACATACGTCAAGCTCCTTCTCAGGTCCCCTGTCCATTCAGAAAACATTGTCTGGAAGATTTGAATATGAACAAGGAGAGACCTCCGAGTTACCTAAAACAGAAGGCACTGCAAAACATGACAGACCAGAAACTTCCAAAGTCATAGAAATGGAAAAACCGGCTGATTTCGTCCAACAGAATACTAAAGTCAGAGGGAAAGAAGGCTTAGAGATAGAATGTAGAGGCTTGGATCATGTGGACTCACTGGGACTTGTACTGATAAGTAGAAGAGCCAGGTACCTGATCAACTGGCTAGTAAATGCTTTGACAAAGCTCCATCATCCCAATACAGAGGAGGGGAGTCCCCTGGTCAGAATCTACGGGCCAAATATAAAATTTGAGAGAGGACCTGCACTGGCATTCAATGTGTTTGATTGGAAAGGAGAAAAAGTTGAGCCCATTCTCCTACAGAAGCTTGCAGATCGAAGCAATATTTCTCTGAGCTATGGATTCTTACACCACTTATGGTTCTCAGACAAGTACGAGGCAGAGAAGCAGAGGGTCATTGAGAGAAGAGAAACTGAAGCAAAGGGAATGGCACAAAACAAGAGGAAAGGCAAAGATGATCTTGGCATAACAGTGGTCACGGCTGCACTGGGGTTTCTGACAAATTTCGAAGACATATACAGGCTTTGGGCTTTTGTTGCTCAGTTCCTGGATGCAGACTTCGTGGAGAAAGAGCGATGGAGATACACTGCTCTTAATCAGAAGACTATTGAAGTTTAA 1965 0.4478 MHSLCSGDATQVCLHGCCPRPVPLPEPQKKVPSSRSTAADCRRDFAATTAACFFPNTQFTNHESLPSLQESFTLFEEAYPQYSETDQADRIRAQEYHHLLLSNHICLDYIGIGLFSHCQIQIKTSSPTTIASTSSPSNLPSPQSSNIPLFGISYKSVNLKSLLQYGGQESALESAMKRKIMGFLNISENDYCMVFTANRTSAFKLLAESYPFQSSQKLLTVYDYESEAVEAMVETSEKRGARVMSAEFSWPRLRVNSGKLRKMVVRNKKKKNRGLFVFPLQSRMTGARYHYLWMNIAQENGWHVLLDACALGPKDMDTFGLSLFRPDFLICSFYKVFGENPTGFGCLFVKKSTVPILEASTSTGIVNLVPAKKLFWLPADSSGTDTEPEQTSKFEFQEELHTSSSFSGPLSIQKTLSGRFEYEQGETSELPKTEGTAKHDRPETSKVIEMEKPADFVQQNTKVRGKEGLEIECRGLDHVDSLGLVLISRRARYLINWLVNALTKLHHPNTEEGSPLVRIYGPNIKFERGPALAFNVFDWKGEKVEPILLQKLADRSNISLSYGFLHHLWFSDKYEAEKQRVIERRETEAKGMAQNKRKGKDDLGITVVTAALGFLTNFEDIYRLWAFVAQFLDADFVEKERWRYTALNQKTIEV* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0772 654 Gene3D Aspartate Aminotransferase, domain 1 469 640 IPR015422 GO:0003824
Vvi16g0772 654 MobiDBLite consensus disorder prediction 423 444 - -
Vvi16g0772 654 SUPERFAMILY PLP-dependent transferases 169 364 IPR015424 -
Vvi16g0772 654 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 72 615 - -
Vvi16g0772 654 MobiDBLite consensus disorder prediction 425 444 - -
Vvi16g0772 654 SUPERFAMILY PLP-dependent transferases 475 633 IPR015424 -
Vvi16g0772 654 Gene3D - 156 395 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0772 Vvi-Chr16 15611865 15613829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0772 - - vvi:100248586 1301.58